Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq17588 147 2e-30
>seq17588
Length=255762
Score = 147 bits (162), Expect = 2e-30
Identities = 382/571 (67%), Gaps = 20/571 (4%)
Strand=Plus/Plus
Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041
||||| ||||| ||||| ||||| |||||||||| || | ||| |||| || ||||
Sbjct 177832 CACGTCGAACTTGCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCGAATATTTC 177891
Query 51042 GCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT 51100
||| || || | | |||| ||||| | || || |||||||| || || || ||
Sbjct 177892 GCGCTCCTTCCA-GCCCTGGTCGTGGATGCCCGCGATCGACCACATGCACCCGACGTACC 177950
Query 51101 TGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATG 51160
||| || ||||| || |||| ||||| ||||||| || | ||||| | | |
Sbjct 177951 CGTTCGGGTCGCGCCCGTCCAGACTGTAGCGATCGTTCAGGTAGATGGCCGTCTCGAGCG 178010
Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220
|| || | | ||||||| |||| || ||||| |||||||||||||||| | |
Sbjct 178011 CCTCCTCCGGCGTTCGCGTCCACTCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGC 178070
Query 51221 CGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAG 51280
||||||||||| |||||| | |||| || |||| ||||||| |||||||| |
Sbjct 178071 CGTGCATCTTGGCCTCGCGCACCATCTGCAGCTGGGCCGCATTCCACAGGTCGTCGTGCG 178130
Query 51281 TTT-GGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTGT 51339
||| ||| | | ||||||| | |||| | | | | | | || |||| |
Sbjct 178131 TTTCGGCCGCCT-CCAGCTCCTGCCGCGTGTA---GCACCACGTACGCTTGTCTTTGCGG 178186
Query 51340 TGCTCGATC-GTTTCTT--GAGCCCATTGTGGTGCGCCTTCAACACAGTCGTAGCGGTCG 51396
|| ||| || | |||| | ||||| | || || | | | ||||||| | ||
Sbjct 178187 TGGTCGTTCAGCGTCTTGCGCGCCCACTCGTACGCACCGGCCAGATTGTCGTAGTTGGCG 178246
Query 51397 TTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCGATGTATCTG 51456
|||| |||||| || || |||| |||||||||||| || | |||| ||| | | |
Sbjct 178247 TTGTGGAAACAGAAGTTATCGGACAGTTCGCGGCGCACGATCGCTTCCTCGCAGAACGCG 178306
Query 51457 TCCACACTATCAGGATGCGAAGGCTTTAAG--CTTAATATCTTCAACACAA---CTCGCT 51511
||||||| || || ||||| | ||| | || | || || | ||||
Sbjct 178307 GCCACACTGTCGCCGTG---TCGCTTTCCGTACTT--TTTCACCGCCAGAATCGCACGCT 178361
Query 51512 GCACGGAAATTTGGCCAAAGTGAAACCATGG 51542
| |||||||| ||||| ||||||||||| ||
Sbjct 178362 GGACGGAAATGTGGCCGAAGTGAAACCACGG 178392
Score = 141 bits (156), Expect = 8e-29
Identities = 319/471 (68%), Gaps = 10/471 (2%)
Strand=Plus/Plus
Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041
||||| ||||| ||||| ||||| |||||||||| || | ||| |||| || ||||
Sbjct 179714 CACGTCGAACTTGCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCGAATATTTC 179773
Query 51042 GCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT 51100
||| || || | | |||| ||||| | || || |||||||| || || || ||
Sbjct 179774 GCGCTCCTTCCA-GCCCTGGTCGTGGATGCCCGCGATCGACCACATGCACCCGACGTACC 179832
Query 51101 TGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATG 51160
||| || ||||| || |||| ||||| ||||||| || | ||||| | | |
Sbjct 179833 CGTTCGGGTCGCGCCCGTCCAGACTGTAGCGATCGTTCAGGTAGATGGCCGTCTCGAGCG 179892
Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220
|| || | | ||||||| |||| || ||||| |||||||||||||||| | |
Sbjct 179893 CCTCCTCCGGCGTTCGCGTCCACTCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGC 179952
Query 51221 CGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAG 51280
||||||||||| |||||| | |||| || |||| ||||||| |||||||| |
Sbjct 179953 CGTGCATCTTGGCCTCGCGCACCATCTGCAGCTGGGCCGCATTCCACAGGTCGTCGTGCG 180012
Query 51281 TTT-GGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTGT 51339
||| ||| | | ||||||| | |||| | | | | | | || |||| |
Sbjct 180013 TTTCGGCCGCCT-CCAGCTCCTGCCGCGTGTA---GCACCACGTACGCTTGTCTTTGCGG 180068
Query 51340 TGCTCGATC-GTTTCTT--GAGCCCATTGTGGTGCGCCTTCAACACAGTCGTAGCGGTCG 51396
|| ||| || | |||| | ||||| | || || | | | ||||||| | ||
Sbjct 180069 TGGTCGTTCAGCGTCTTGCGCGCCCACTCGTACGCACCGGCCAGATTGTCGTAGTTGGCG 180128
Query 51397 TTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCG 51447
|||| |||||| || || |||| |||||||||||| || | |||| |||
Sbjct 180129 TTGTGGAAACAGAAGTTATCGGACAGTTCGCGGCGCACGATCGCTTCCTCG 180179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433146512077475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |