Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq17588 147 2e-30 >seq17588 Length=255762 Score = 147 bits (162), Expect = 2e-30 Identities = 382/571 (67%), Gaps = 20/571 (4%) Strand=Plus/Plus Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041 ||||| ||||| ||||| ||||| |||||||||| || | ||| |||| || |||| Sbjct 177832 CACGTCGAACTTGCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCGAATATTTC 177891 Query 51042 GCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT 51100 ||| || || | | |||| ||||| | || || |||||||| || || || || Sbjct 177892 GCGCTCCTTCCA-GCCCTGGTCGTGGATGCCCGCGATCGACCACATGCACCCGACGTACC 177950 Query 51101 TGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATG 51160 ||| || ||||| || |||| ||||| ||||||| || | ||||| | | | Sbjct 177951 CGTTCGGGTCGCGCCCGTCCAGACTGTAGCGATCGTTCAGGTAGATGGCCGTCTCGAGCG 178010 Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220 || || | | ||||||| |||| || ||||| |||||||||||||||| | | Sbjct 178011 CCTCCTCCGGCGTTCGCGTCCACTCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGC 178070 Query 51221 CGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAG 51280 ||||||||||| |||||| | |||| || |||| ||||||| |||||||| | Sbjct 178071 CGTGCATCTTGGCCTCGCGCACCATCTGCAGCTGGGCCGCATTCCACAGGTCGTCGTGCG 178130 Query 51281 TTT-GGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTGT 51339 ||| ||| | | ||||||| | |||| | | | | | | || |||| | Sbjct 178131 TTTCGGCCGCCT-CCAGCTCCTGCCGCGTGTA---GCACCACGTACGCTTGTCTTTGCGG 178186 Query 51340 TGCTCGATC-GTTTCTT--GAGCCCATTGTGGTGCGCCTTCAACACAGTCGTAGCGGTCG 51396 || ||| || | |||| | ||||| | || || | | | ||||||| | || Sbjct 178187 TGGTCGTTCAGCGTCTTGCGCGCCCACTCGTACGCACCGGCCAGATTGTCGTAGTTGGCG 178246 Query 51397 TTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCGATGTATCTG 51456 |||| |||||| || || |||| |||||||||||| || | |||| ||| | | | Sbjct 178247 TTGTGGAAACAGAAGTTATCGGACAGTTCGCGGCGCACGATCGCTTCCTCGCAGAACGCG 178306 Query 51457 TCCACACTATCAGGATGCGAAGGCTTTAAG--CTTAATATCTTCAACACAA---CTCGCT 51511 ||||||| || || ||||| | ||| | || | || || | |||| Sbjct 178307 GCCACACTGTCGCCGTG---TCGCTTTCCGTACTT--TTTCACCGCCAGAATCGCACGCT 178361 Query 51512 GCACGGAAATTTGGCCAAAGTGAAACCATGG 51542 | |||||||| ||||| ||||||||||| || Sbjct 178362 GGACGGAAATGTGGCCGAAGTGAAACCACGG 178392 Score = 141 bits (156), Expect = 8e-29 Identities = 319/471 (68%), Gaps = 10/471 (2%) Strand=Plus/Plus Query 50982 CACGTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTT 51041 ||||| ||||| ||||| ||||| |||||||||| || | ||| |||| || |||| Sbjct 179714 CACGTCGAACTTGCGCTTGCAGCCGTCGTAGTTCATGTAGCGAATTTTGCCGAATATTTC 179773 Query 51042 GCGTTCTTTGAACGGCCTG-TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT 51100 ||| || || | | |||| ||||| | || || |||||||| || || || || Sbjct 179774 GCGCTCCTTCCA-GCCCTGGTCGTGGATGCCCGCGATCGACCACATGCACCCGACGTACC 179832 Query 51101 TGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATG 51160 ||| || ||||| || |||| ||||| ||||||| || | ||||| | | | Sbjct 179833 CGTTCGGGTCGCGCCCGTCCAGACTGTAGCGATCGTTCAGGTAGATGGCCGTCTCGAGCG 179892 Query 51161 CCATGTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAAC 51220 || || | | ||||||| |||| || ||||| |||||||||||||||| | | Sbjct 179893 CCTCCTCCGGCGTTCGCGTCCACTCCAGTATCTTCTTCGCCCAGTACATGCGCAGAAAGC 179952 Query 51221 CGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAG 51280 ||||||||||| |||||| | |||| || |||| ||||||| |||||||| | Sbjct 179953 CGTGCATCTTGGCCTCGCGCACCATCTGCAGCTGGGCCGCATTCCACAGGTCGTCGTGCG 180012 Query 51281 TTT-GGCAACTTGCCAGCTCTGTCAAATTGTAAATGTATGAGCGATGATCGTATTTGTGT 51339 ||| ||| | | ||||||| | |||| | | | | | | || |||| | Sbjct 180013 TTTCGGCCGCCT-CCAGCTCCTGCCGCGTGTA---GCACCACGTACGCTTGTCTTTGCGG 180068 Query 51340 TGCTCGATC-GTTTCTT--GAGCCCATTGTGGTGCGCCTTCAACACAGTCGTAGCGGTCG 51396 || ||| || | |||| | ||||| | || || | | | ||||||| | || Sbjct 180069 TGGTCGTTCAGCGTCTTGCGCGCCCACTCGTACGCACCGGCCAGATTGTCGTAGTTGGCG 180128 Query 51397 TTGTAGAAACAAAAATTGTCGGCCAGTTCGCGGCGTACCACGACTTCGTCG 51447 |||| |||||| || || |||| |||||||||||| || | |||| ||| Sbjct 180129 TTGTGGAAACAGAAGTTATCGGACAGTTCGCGGCGCACGATCGCTTCCTCG 180179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433146512077475