Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008348.1 Length=168041 Score E Sequences producing significant alignments: (Bits) Value seq3126 98.7 1e-15 >seq3126 Length=198095 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 38445 TGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCG 38504 ||||||| | ||||||||||| ||||| ||| || ||| |||||||||| ||| | Sbjct 39357 TGGCCCACGTCCATGAAGCAGAAACCGCAGCAGCTGAGCGACGCCGGCTTCTTCTACACC 39416 Query 38505 GGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCT 38564 || | | || | || ||||| ||| |||||||| || || ||||||||||| | Sbjct 39417 GGGAAGAGCGATCGCGTGAAATGCTTCAGCTGCGGCGGTGGGCTGAAGGACTGGGAACAG 39476 Query 38565 GCGGACGATCCGTGGGCGCAGCACGCGCGCTGGT 38598 | ||||| ||||||| ||||||||| ||||| Sbjct 39477 GACGACGAACCGTGGGAGCAGCACGCCATCTGGT 39510 Score = 98.7 bits (108), Expect = 1e-15 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 38445 TGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATTCG 38504 ||||||| | ||||||||||| ||||| ||| || ||| |||||||||| ||| | Sbjct 161009 TGGCCCACGTCCATGAAGCAGAAACCGCAGCAGCTGAGCGACGCCGGCTTCTTCTACACC 160950 Query 38505 GGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGCCT 38564 || | | || | || ||||| ||| |||||||| || || ||||||||||| | Sbjct 160949 GGGAAGAGCGATCGCGTGAAATGCTTCAGCTGCGGCGGTGGGCTGAAGGACTGGGAACAG 160890 Query 38565 GCGGACGATCCGTGGGCGCAGCACGCGCGCTGGT 38598 | ||||| ||||||| ||||||||| ||||| Sbjct 160889 GACGACGAACCGTGGGAGCAGCACGCCATCTGGT 160856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537372265825400