Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5301 114 1e-20 seq247 111 2e-19 >seq5301 Length=34939 Score = 114 bits (126), Expect = 1e-20 Identities = 78/87 (90%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 14160 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 14219 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||| |||||||| Sbjct 14220 GTGGGTTCGAACCCCACTTCTGACAAA 14246 Score = 114 bits (126), Expect = 1e-20 Identities = 78/87 (90%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 31060 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 31001 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||| |||||||| Sbjct 31000 GTGGGTTCGAACCCCACTTCTGACAAA 30974 Score = 107 bits (118), Expect = 2e-18 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 ||| |||||||| |||||||||||||||||||||| |||||||||| |||||||||| Sbjct 13231 AGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGCGTGG 13290 Query 126327 GTTCGAACCCCACACCTGACAAA 126349 ||||||||||||| |||||||| Sbjct 13291 GTTCGAACCCCACTTCTGACAAA 13313 >seq247 Length=106571 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 81244 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 81185 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 81184 GTGGGTTCGAACCCCACTTCTGACA 81160 Score = 111 bits (122), Expect = 2e-19 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 95071 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 95130 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 95131 GTGGGTTCGAACCCCACTTCTGACA 95155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556621593482600