Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 185 7e-42
>seq2173
Length=41539
Score = 185 bits (204), Expect = 7e-42
Identities = 1001/1577 (63%), Gaps = 36/1577 (2%)
Strand=Plus/Minus
Query 128809 GCCGGCTTGGTGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATG 128868
|| ||||| |||||||||||||||||||| || |||| || | ||||| | ||| | |
Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483
Query 128869 TGAATCGTGGTCAACAATGCGTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTT 128928
|| |||| |||| | ||||| | |||| || || || || || ||
Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423
Query 128929 TGATCAATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCC 128988
|| || || || | || || ||||| ||||| || | ||||||| || |||
Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 18363
Query 128989 CACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTG 129048
|| ||||||||||| || || | ||| | || ||||||| || |||||||| | |
Sbjct 18362 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATCGAG 18303
Query 129049 CCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAA 129108
||||||| || | ||| |||| ||| | |||| ||| | | || ||| |
Sbjct 18302 CCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGA 18243
Query 129109 TCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAA 129168
|| | | ||| || | ||| | || ||||| || |||| || ||||||||| ||||
Sbjct 18242 TCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAA 18183
Query 129169 ATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCG 129228
| |||| || ||||||| ||||| || |||||||| || ||||| ||||| | ||
Sbjct 18182 ACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCC 18123
Query 129229 GTGGGCATGTAAGCCACGCA-AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttt 129287
|| ||||| || | ||| || ||||| |||| |||||| | ||| | ||| |
Sbjct 18122 GTCGGCATCGGCGCGA-GCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCT-TTTCCT 18065
Query 129288 tAATTGT-GTCCAGTCCCACATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATA 129346
| | || | ||| | ||||| || ||| | ||||||| |||||| |||| |
Sbjct 18064 TCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAA 18005
Query 129347 TACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATT 129406
| ||| || | ||| ||| | |||| | || | |||| |
Sbjct 18004 TGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCT 17945
Query 129407 CGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAAT-TTTGGTG-TTCAACAC 129464
|||| || ||||||| || || | || || || || ||| | || || || | |
Sbjct 17944 CGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTC--AAATATCTGCTGATTGAGCTT 17887
Query 129465 TTTGGCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTG 129524
| |||| | || |||||||| | | || || | || | || |||| ||| ||
Sbjct 17886 CTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTG 17827
Query 129525 AATACCCACACCGATGGGTCGATGTTTTCTATTGGA---TTTTTGTGCCGACAACAAGGG 129581
| || | |||||| || || || | || || || | ||| || | ||
Sbjct 17826 GACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACC---GG 17770
Query 129582 ATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTT 129641
||| |||| | ||| ||||| ||||| || || ||| ||||| | ||| | |||
Sbjct 17769 GTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTT 17710
Query 129642 TAACATTTCAAAATTGTACTCGCCTAC-ATCGATGTCGAC-AAATTGATTGACACAAATC 129699
| | | | |||| || | ||| ||| | ||| || || | || | ||||
Sbjct 17709 CAGCTTCGCGAAATCATA----CGTACGGTCGGACTGGACGAACATGTTCAACGC-AATC 17655
Query 129700 GAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCAC 129759
||||||| ||||| || || ||||| || |||||| ||||| |||| |||
Sbjct 17654 GAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAA 17595
Query 129760 AAATTACTATTTTTAATGGTGCCCAAATGCTTT--TGATTACTTTTCATGTTGCAAGCAT 129817
| ||| || |||||||| ||| ||| || || ||||| ||||| || |
Sbjct 17594 AGGTTAGAGCACTTGATGGTGCC--GATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGT 17537
Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACA 129877
| ||||||| ||||||||| |||||| || || || | ||||| || | |||
Sbjct 17536 CCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA 17477
Query 129878 AGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATACAGTT 129937
|| | ||||| | ||| | | || ||| ||||| || || |||| |
Sbjct 17476 GATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACT 17417
Query 129938 GTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAA---CGGCGATTCACGCGGACACATCA 129994
|| || ||| ||| || | ||| ||| || | || |||| |||||||
Sbjct 17416 TCTCGAACTCTTCGCC--CCAC-GAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCA 17360
Query 129995 AACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGT 130054
|||||||| || | | ||| || || || | ||| |||| ||| || | ||| || ||||
Sbjct 17359 AACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGT 17300
Query 130055 ACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAAT 130114
| |||| || || || ||||| || |||| ||||| || | || |
Sbjct 17299 AGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACT 17240
Query 130115 CGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCG---TTTGC 130171
| | | ||| |||||||||| || | || || || | || ||| ||| ||||
Sbjct 17239 CAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGC 17180
Query 130172 CCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGT 130231
| || || || |||| || | | |||||||| || |||| ||| | | |||| ||||
Sbjct 17179 CGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGT 17120
Query 130232 TGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTA 130291
| | | ||||| |||| ||| | | || ||||| | | || ||| | |
Sbjct 17119 TCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCA 17060
Query 130292 GACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATG 130350
| || ||||| ||| || | || || |||| ||||| | || | ||||| || || |||
Sbjct 17059 GCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGATG 17001
Query 130351 CCAACGATACTGTCTTC 130367
|| |||| ||||| ||
Sbjct 17000 CCTTCGATGCTGTCGTC 16984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419552208076225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |