Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2173 185 7e-42 >seq2173 Length=41539 Score = 185 bits (204), Expect = 7e-42 Identities = 1001/1577 (63%), Gaps = 36/1577 (2%) Strand=Plus/Minus Query 128809 GCCGGCTTGGTGCGCAAATAGTACATGCCTGTTTTCAAACCGCTTTTCCAAGTGTGCATG 128868 || ||||| |||||||||||||||||||| || |||| || | ||||| | ||| | | Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483 Query 128869 TGAATCGTGGTCAACAATGCGTAGGTGGGTTGACTCaaaaaaaTATTAAATGATTGACTT 128928 || |||| |||| | ||||| | |||| || || || || || || Sbjct 18482 TGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGAC 18423 Query 128929 TGATCAATAAAGGGGCCGCGATCGGCAGCCATACCAATCAAATTTTTCACTTTCATTTCC 128988 || || || || | || || ||||| ||||| || | ||||||| || ||| Sbjct 18422 TGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCC 18363 Query 128989 CACACCGTTTTGTAAAGCTCTCTCACGTGTTTTGGTATTTCTTCAATGTTCTGCACGCTG 129048 || ||||||||||| || || | ||| | || ||||||| || |||||||| | | Sbjct 18362 CAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATCGAG 18303 Query 129049 CCGTTGTTTGCAATAATTTTGTTTCGCATCTGTTCGTTGTACAAATTCAGTTTGATCAAA 129108 ||||||| || | ||| |||| ||| | |||| ||| | | || ||| | Sbjct 18302 CCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGA 18243 Query 129109 TCGTCGGTCAAGTATTTGTTTATTACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAA 129168 || | | ||| || | ||| | || ||||| || |||| || ||||||||| |||| Sbjct 18242 TCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAA 18183 Query 129169 ATGTTGTTGGTGAACGGCTCAAACGATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCG 129228 | |||| || ||||||| ||||| || |||||||| || ||||| ||||| | || Sbjct 18182 ACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCC 18123 Query 129229 GTGGGCATGTAAGCCACGCA-AAGCGAGTTTCGCAAACCGTGCTGTTTAATGTCtttttt 129287 || ||||| || | ||| || ||||| |||| |||||| | ||| | ||| | Sbjct 18122 GTCGGCATCGGCGCGA-GCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCT-TTTCCT 18065 Query 129288 tAATTGT-GTCCAGTCCCACATCGATGTGGGTGTGTGATTCCACAAGTCGTATTGCAATA 129346 | | || | ||| | ||||| || ||| | ||||||| |||||| |||| | Sbjct 18064 TCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAA 18005 Query 129347 TACCCAAACTGGCGGGACTGGAAAAGTAGGAATCGTGCACGCCGTAAGCTTTTGCCAATT 129406 | ||| || | ||| ||| | |||| | || | |||| | Sbjct 18004 TGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCT 17945 Query 129407 CGCAACTCGCTTCCAATGCGCCAAAATAAATTGTTTCGGCAAT-TTTGGTG-TTCAACAC 129464 |||| || ||||||| || || | || || || || ||| | || || || | | Sbjct 17944 CGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTC--AAATATCTGCTGATTGAGCTT 17887 Query 129465 TTTGGCCTGGTCGCTTTCGTACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTG 129524 | |||| | || |||||||| | | || || | || | || |||| ||| || Sbjct 17886 CTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTG 17827 Query 129525 AATACCCACACCGATGGGTCGATGTTTTCTATTGGA---TTTTTGTGCCGACAACAAGGG 129581 | || | |||||| || || || | || || || | ||| || | || Sbjct 17826 GACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACC---GG 17770 Query 129582 ATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTCGTTACGTATTT 129641 ||| |||| | ||| ||||| ||||| || || ||| ||||| | ||| | ||| Sbjct 17769 GTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTT 17710 Query 129642 TAACATTTCAAAATTGTACTCGCCTAC-ATCGATGTCGAC-AAATTGATTGACACAAATC 129699 | | | | |||| || | ||| ||| | ||| || || | || | |||| Sbjct 17709 CAGCTTCGCGAAATCATA----CGTACGGTCGGACTGGACGAACATGTTCAACGC-AATC 17655 Query 129700 GAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCAC 129759 ||||||| ||||| || || ||||| || |||||| ||||| |||| ||| Sbjct 17654 GAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAA 17595 Query 129760 AAATTACTATTTTTAATGGTGCCCAAATGCTTT--TGATTACTTTTCATGTTGCAAGCAT 129817 | ||| || |||||||| ||| ||| || || ||||| ||||| || | Sbjct 17594 AGGTTAGAGCACTTGATGGTGCC--GATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGT 17537 Query 129818 CTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACA 129877 | ||||||| ||||||||| |||||| || || || | ||||| || | ||| Sbjct 17536 CCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA 17477 Query 129878 AGTCTCGAGCCTTGATCTGTCTTACAAATTTGCCACATTTCTCGTATGCCACATACAGTT 129937 || | ||||| | ||| | | || ||| ||||| || || |||| | Sbjct 17476 GATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACT 17417 Query 129938 GTTCAAATTCTGAGCCGTGTACGGTGTCGAGCAA---CGGCGATTCACGCGGACACATCA 129994 || || ||| ||| || | ||| ||| || | || |||| ||||||| Sbjct 17416 TCTCGAACTCTTCGCC--CCAC-GAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCA 17360 Query 129995 AACTCCACATTCCATCCGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGT 130054 |||||||| || | | ||| || || || | ||| |||| ||| || | ||| || |||| Sbjct 17359 AACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGT 17300 Query 130055 ACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAAT 130114 | |||| || || || ||||| || |||| ||||| || | || | Sbjct 17299 AGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACT 17240 Query 130115 CGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCG---TTTGC 130171 | | | ||| |||||||||| || | || || || | || ||| ||| |||| Sbjct 17239 CAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGC 17180 Query 130172 CCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGT 130231 | || || || |||| || | | |||||||| || |||| ||| | | |||| |||| Sbjct 17179 CGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGT 17120 Query 130232 TGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAACGCTTA 130291 | | | ||||| |||| ||| | | || ||||| | | || ||| | | Sbjct 17119 TCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCA 17060 Query 130292 GACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGT-AGCGTTTCATAAATG 130350 | || ||||| ||| || | || || |||| ||||| | || | ||||| || || ||| Sbjct 17059 GCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGATG 17001 Query 130351 CCAACGATACTGTCTTC 130367 || |||| ||||| || Sbjct 17000 CCTTCGATGCTGTCGTC 16984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419552208076225