Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq27055 84.2 4e-11 >seq27055 Length=447146 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || ||| |||| | || || | Sbjct 53109 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 53168 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| || || || | ||| ||| | || || || || ||||||||||| |||||||| Sbjct 53169 GGTGGTCGGGCGCGACACGTACGGTGTTTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 53228 Query 217956 CGATGC 217961 ||| || Sbjct 53229 CGAAGC 53234 Score = 84.2 bits (92), Expect = 4e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 |||||| ||||||||||| ||||||||||| || ||| |||| | || || | Sbjct 66672 CTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTGGCCGTGTCGGGGCTGGG 66613 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||| || || || | ||| ||| | || || || || ||||||||||| |||||||| Sbjct 66612 GGTGGTCGGGCGCGACACGTACGGTGTTTTTCCGCTGCGCGGTAAGCTGCTGAACGTGCG 66553 Query 217956 CGATGC 217961 ||| || Sbjct 66552 CGAAGC 66547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027384241850965