Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq26551 168 1e-36
>seq26551
Length=145895
Score = 168 bits (186), Expect = 1e-36
Identities = 360/535 (67%), Gaps = 2/535 (0%)
Strand=Plus/Plus
Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317
|||||| || || || ||||| || |||||||| |||||||| | || | || ||
Sbjct 16977 CCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACC 17036
Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377
|| | ||| | ||||| |||||| | || | ||| ||||| || ||
Sbjct 17037 CAGCTCGACGCACTCCTGCTGACCGAGCGAAATCTTCGCCACCGAGCGGGTGATCTTGCG 17096
Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437
||||| || |||| || || | || |||||||||||| ||||| |||||||| ||
Sbjct 17097 CGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTGAACAGGATCCCGTTGCAGGC 17156
Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497
|||||| || ||||| || ||||| | || ||||||| | |||||||||||
Sbjct 17157 GAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAGTAGCCGTACATCTTTGCACA 17216
Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557
||||||||| || || |||| ||| || ||| | || || || | || || ||
Sbjct 17217 TGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTCTGCGGCGTCTCCACCACCTT 17276
Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617
|| | |||||||| || || || |||||||| ||||| || | ||| | |
Sbjct 17277 CCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACCGTTTTCTCCTGGCCGACGGT 17336
Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677
||||| || ||||||| || || || || | ||||||| ||||| ||||| ||
Sbjct 17337 GCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCCACCTCCGCCGTATATTCGCT 17396
Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTT 268737
|| ||||| || | || ||| ||||| || ||| |||| || || | || |||
Sbjct 17397 CAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCAGATTGTAGATTTCGGACGGGCG 17456
Query 268738 GACCTGCTGCACGATCTTCACGAGGTTCGTTG-AGTCGGTGAGGTCTCCGTAGTG 268791
||||| | ||||||||| | | || || |||||| | || ||||||||
Sbjct 17457 CACCTGGGCGATGATCTTCACCA-GCGCGCTGCTGTCGGTCATATCGCCGTAGTG 17510
Score = 163 bits (180), Expect = 5e-35
Identities = 311/458 (68%), Gaps = 0/458 (0%)
Strand=Plus/Plus
Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317
|||||| || || || ||||| || |||||||| |||||||| | || | || ||
Sbjct 15611 CCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACC 15670
Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377
|| | ||| | ||||| |||||| | || | ||| ||||| || ||
Sbjct 15671 CAGCTCGACGCACTCCTGCTGACCGAGCGAAATCTTCGCCACCGAGCGGGTGATCTTGCG 15730
Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437
||||| || |||| || || | || |||||||||||| ||||| |||||||| ||
Sbjct 15731 CGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTGAACAGGATCCCGTTGCAGGC 15790
Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497
|||||| || ||||| || ||||| | || ||||||| | |||||||||||
Sbjct 15791 GAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAGTAGCCGTACATCTTTGCACA 15850
Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557
||||||||| || || |||| ||| || ||| | || || || | || || ||
Sbjct 15851 TGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTCTGCGGCGTCTCCACCACCTT 15910
Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617
|| | |||||||| || || || |||||||| ||||| || | ||| | |
Sbjct 15911 CCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACCGTTTTCTCCTGGCCGACGGT 15970
Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677
||||| || ||||||| || || || || | ||||||| ||||| ||||| ||
Sbjct 15971 GCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCCACCTCCGCCGTATATTCGCT 16030
Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCA 268715
|| ||||| || | || ||| ||||| || ||| |||
Sbjct 16031 CAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCA 16068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921226505577800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |