Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq26551 168 1e-36 >seq26551 Length=145895 Score = 168 bits (186), Expect = 1e-36 Identities = 360/535 (67%), Gaps = 2/535 (0%) Strand=Plus/Plus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| || || || ||||| || |||||||| |||||||| | || | || || Sbjct 16977 CCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACC 17036 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377 || | ||| | ||||| |||||| | || | ||| ||||| || || Sbjct 17037 CAGCTCGACGCACTCCTGCTGACCGAGCGAAATCTTCGCCACCGAGCGGGTGATCTTGCG 17096 Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437 ||||| || |||| || || | || |||||||||||| ||||| |||||||| || Sbjct 17097 CGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTGAACAGGATCCCGTTGCAGGC 17156 Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497 |||||| || ||||| || ||||| | || ||||||| | ||||||||||| Sbjct 17157 GAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAGTAGCCGTACATCTTTGCACA 17216 Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557 ||||||||| || || |||| ||| || ||| | || || || | || || || Sbjct 17217 TGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTCTGCGGCGTCTCCACCACCTT 17276 Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617 || | |||||||| || || || |||||||| ||||| || | ||| | | Sbjct 17277 CCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACCGTTTTCTCCTGGCCGACGGT 17336 Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677 ||||| || ||||||| || || || || | ||||||| ||||| ||||| || Sbjct 17337 GCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCCACCTCCGCCGTATATTCGCT 17396 Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTT 268737 || ||||| || | || ||| ||||| || ||| |||| || || | || ||| Sbjct 17397 CAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCAGATTGTAGATTTCGGACGGGCG 17456 Query 268738 GACCTGCTGCACGATCTTCACGAGGTTCGTTG-AGTCGGTGAGGTCTCCGTAGTG 268791 ||||| | ||||||||| | | || || |||||| | || |||||||| Sbjct 17457 CACCTGGGCGATGATCTTCACCA-GCGCGCTGCTGTCGGTCATATCGCCGTAGTG 17510 Score = 163 bits (180), Expect = 5e-35 Identities = 311/458 (68%), Gaps = 0/458 (0%) Strand=Plus/Plus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| || || || ||||| || |||||||| |||||||| | || | || || Sbjct 15611 CCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCGCTTCGAATCGAGATTACC 15670 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377 || | ||| | ||||| |||||| | || | ||| ||||| || || Sbjct 15671 CAGCTCGACGCACTCCTGCTGACCGAGCGAAATCTTCGCCACCGAGCGGGTGATCTTGCG 15730 Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437 ||||| || |||| || || | || |||||||||||| ||||| |||||||| || Sbjct 15731 CGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTGAACAGGATCCCGTTGCAGGC 15790 Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497 |||||| || ||||| || ||||| | || ||||||| | ||||||||||| Sbjct 15791 GAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAGTAGCCGTACATCTTTGCACA 15850 Query 268498 TGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTT 268557 ||||||||| || || |||| ||| || ||| | || || || | || || || Sbjct 15851 TGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTCTGCGGCGTCTCCACCACCTT 15910 Query 268558 GCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGAT 268617 || | |||||||| || || || |||||||| ||||| || | ||| | | Sbjct 15911 CCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACCGTTTTCTCCTGGCCGACGGT 15970 Query 268618 TCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGG 268677 ||||| || ||||||| || || || || | ||||||| ||||| ||||| || Sbjct 15971 GCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCCACCTCCGCCGTATATTCGCT 16030 Query 268678 CATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCA 268715 || ||||| || | || ||| ||||| || ||| ||| Sbjct 16031 CAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCA 16068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921226505577800