Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq1535 86.0 2e-13 >seq1535 Length=63841 Score = 86.0 bits (94), Expect = 2e-13 Identities = 194/287 (68%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 3198 CTGCGAGCTGCTAAACTTTGTCAACGTTGTCGCACAGATATGCTTCATGAATGCCTTTAT 3257 |||||||||||| ||||| |||||||| ||| |||||| | ||||||| | ||| | Sbjct 53156 CTGCGAGCTGCTCAACTTCGTCAACGTGCTCGGACAGATCTACTTCATGGACTTCTTCCT 53097 Query 3258 AGGCGAAGACTTTTTGTTGTACGGAATCTATGT--TACCTTCTTCAACCAG--GAAGCCG 3313 | || || || | |||||| | | | || | | || ||| | || | | ||| Sbjct 53096 GGACGGGGAGTTCACGACGTACGGCAGCGACGTAGTGCGTT--TCACCGAGATGGAACCG 53039 Query 3314 CCCATCCGAACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTT 3373 || | || || || ||| ||| ||||| || | | || ||||| | Sbjct 53038 GAG----GAGCGTGGAGATCCT-ATGGCGCGCGTCTTCCCGAAGGTGACCAAGTGTACCT 52984 Query 3374 TTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGG 3433 | ||||| |||||||| || || | | | || | ||| || || ||| | || ||| Sbjct 52983 TCCACAAGTACGGTCCGTCCGGAAGCGTACAGAAATTCGACGGTCTGTGCGTGCTGCCGC 52924 Query 3434 AGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||| | |||||||||||||||||| | ||||| |||||||||||| Sbjct 52923 TGAACATCGTCAACGAGAAGATCTACGTGTTCCTGTGGTTCTGGTTC 52877 Score = 84.2 bits (92), Expect = 5e-13 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 2675 CCGTGAAGGGCTTAATAAAGCTTCCAACAG-TCTCCATCGACAATGTATTCTTCCGGTTG 2733 |||||||||| || | ||||| | ||| | | ||||||||| |||||||| || Sbjct 53679 CCGTGAAGGGTCTACTTAAGCTAG-ACCAGGTGTGCATCGACAACAACATCTTCCGGCTG 53621 Query 2734 CATTACCAGTTCACCGTGATCATCCTCATCGCGTTTTCATTGCTGGTGACTTCGCGGCAG 2793 || ||| || || ||||||||||| |||||||| || |||||||| || ||||| ||| Sbjct 53620 CACTACAAGGCGACGGTGATCATCCTGATCGCGTTCTCGTTGCTGGTCACCTCGCGACAG 53561 Query 2794 TAC 2796 ||| Sbjct 53560 TAC 53558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12475309177500