Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 453 2e-122
>seq2173
Length=41539
Score = 453 bits (502), Expect = 2e-122
Identities = 1206/1799 (67%), Gaps = 74/1799 (4%)
Strand=Plus/Minus
Query 243758 ACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTCCACTGGACCAGGCGTGG 243817
||||||| ||| || | || ||||||||||| ||||| || || | ||| ||||||
Sbjct 18545 ACGGCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGG 18486
Query 243818 AGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGTCCTCGCACAGAAAGAGG 243877
| |||||| | ||||||||| | | || || ||| ||| | || || |
Sbjct 18485 AAGTGCATCGACGTCAGCTTGC----CGT-AG--TTCGGT--TCCGC---CACGTGGATG 18438
Query 243878 TTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATG-AGGTC 243936
|||| ||||| |||||||| ||| | |||| || || ||||| |||| | ||
Sbjct 18437 TTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTT 18378
Query 243937 CTTCTGAGATATCTCATACGCCGTCTTGTA--GATGG-GCTTGAGGTGCTCGGGGAACCC 243993
||| || ||||| | |||| ||||| ||| | || | | || || |
Sbjct 18377 -TTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGC---ACTTCCTTCGGTATTTG 18322
Query 243994 TTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG-CATGTTATCGTTCC 244052
||||||||||| | |||||| |||||| | | || || || | ||| | ||||| ||
Sbjct 18321 CTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGAT-TGTGTTCTTCATATCATCGTCCC 18263
Query 244053 ACAGGCCCAA-GCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCTCCC 244111
|||| || | | || || ||| || |||||| |||||||||||||||||| |||
Sbjct 18262 ACAGACCGTGCGTGGTC-AGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCC 18204
Query 244112 GACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCC 244171
||||| ||||| || | ||| | |||| | |||||||| ||| ||||||||
Sbjct 18203 GACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCC 18144
Query 244172 AGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCG 244231
| || || ||||| || |||||||| |||| | |||||| ||| | ||| |||
Sbjct 18143 AAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCG 18084
Query 244232 TGCCTCTGGATGCGGAGTCTGAGCTCGTTCCA-GTCCCACATGCCCGAGAGGTCC-TCGC 244289
|| | ||| | ||| || ||| ||| | || || | |||||| |||
Sbjct 18083 TG--TTTGGC-----AATCTTT--TCCTTCAGCGTCGCCCAATTCC-ACAGGTCCGTCG- 18035
Query 244290 GTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGG 244349
|| | ||||||||| ||||||| | |||||||| || || |||||||| |
Sbjct 18034 GTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACG 17975
Query 244350 TCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGA 244409
|| ||| || || || | ||||| || ||||| | || || || |||||||||
Sbjct 17974 TCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGA 17915
Query 244410 TGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT--GAAGGGGATGCC 244467
||||||| || ||| || || | | | |||| ||||| | | |||| |||
Sbjct 17914 TGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCT--CCGCACTCTCGTACGGGAAGCC 17857
Query 244468 CATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTT 244527
||||| ||||| | || |||| ||||| |||||||| ||||| || | ||| ||| |
Sbjct 17856 CATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGCGCAT 17797
Query 244528 GTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTT 244587
||| |||||| | ||||| ||||| ||||| ||||| ||||||| | |||||| | |||
Sbjct 17796 GTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTCAAGTT 17737
Query 244588 GCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCCTC 244647
||| || | || | | || || |||| | || || ||| ||| || ||
Sbjct 17736 GCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATAC--GTACGG----TC 17683
Query 244648 GGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCAC 244707
|| ||| || ||| ||| | || | |||||||||||| || |||||
Sbjct 17682 GGAC-TGG--------ACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGCCAC 17632
Query 244708 CTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCC 244767
|| ||| | ||||| |||||||||||||| |||||| |||||||||||||||
Sbjct 17631 TTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGTGCC 17572
Query 244768 CAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCC 244827
| || || || ||| ||| ||||| ||||||||||| |||||| | || | ||
Sbjct 17571 GATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACGGTACGCC 17512
Query 244828 GGTCTCGAGCTGGGCGACGAGGA-CGCTGTTCCAGAGGTCCCTAGCCTTGACC-GTCCTG 244885
||||| | ||||| ||| || ||| ||| || ||| ||||| ||| | |
Sbjct 17511 CGTCTCCACCTGGGATTCGATGATCGC-AAACCACAGATCCTGCGCCTTTACCTGGCGGA 17453
Query 244886 CGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACC 244945
|| | |||||| ||| |||| ||||||| ||||||||| ||||||
Sbjct 17452 TGAAGC-GGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCCACGAA 17394
Query 244946 TCGTCTAGGCCGGGGCACGACG-CCGGGCACATGAGACTCCAC---TCG-CCGCCGTCCT 245000
||| | | ||||| || | || ||||||||| | ||||||| ||| |||| |||
Sbjct 17393 TCGGCCAATCCGGGACA-GTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCC-TCC- 17337
Query 245001 TGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCT 245060
|| | ||||||||| || || || |||||||| || | ||| | ||||| | | |
Sbjct 17336 --ACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCA 17279
Query 245061 GCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGG 245120
||| ||| ||| ||||| ||| |||| |||||||| ||||| || ||| ||||||| |
Sbjct 17278 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACG 17219
Query 245121 GCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCAC-CATCCTC 245179
|||||| ||||| || | || || |||||||| ||||| ||||| || || | | |
Sbjct 17218 GCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTG 17159
Query 245180 TCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCC 245239
|| | |||| | | |||||| | ||||| | ||||| || ||||| |||||
Sbjct 17158 CCGTG-TTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCG 17100
Query 245240 TTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGC 245299
|||||| | ||||| ||| || | | | | || || | || ||||| |
Sbjct 17099 GAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGAC 17040
Query 245300 TTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTC 245359
|||||||| || ||||| ||| | ||||| ||||| || |||||||| |
Sbjct 17039 TTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGAC 16980
Query 245360 ATGTTGAGCAGAAAGCAGGAGGACAGCTGGGG-CTTGGGGCTGCACGAGTTGAACAGAGT 245418
||| | ||||||||||| || ||||||||||| | | | || || ||||| ||
Sbjct 16979 ATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGC-CGCCGCGAACATGGT 16921
Query 245419 GGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAGCAGAGCGTC 245478
|| ||| ||||||||||| || |||||| | ||||||| || | ||| ||
Sbjct 16920 CGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCTC 16861
Query 245479 GATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGCGTCTCGA 245537
||||| ||| ||||| | |||| | ||| || | ||||| ||| ||||||
Sbjct 16860 GATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGA 16802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 943933547292400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |