Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq17588 120 2e-22 >seq17588 Length=255762 Score = 120 bits (132), Expect = 2e-22 Identities = 203/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 37821 GCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAG 37880 ||||| |||||||| | ||||||| ||||| || | ||| | |||||||||| ||| Sbjct 178137 GCCGAAACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAAG 178078 Query 37881 ATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCT 37940 ||||| | | |||||||||| ||| ||||| || |||| ||| | | | || Sbjct 178077 ATGCACGGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGAC-GCGAACGCC 178019 Query 37941 C-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGA 37999 || |||||| | ||||| || || || ||| ||||| |||||||||| || Sbjct 178018 GGAGGAGGCGCTCGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGA 177959 Query 38000 TCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGC 38058 || ||||| |||||||| || ||||||| || |||||| | ||||| | |||| Sbjct 177958 CCCGAACGGGTACGTCGGGTGCATGTGGTCGATC-GCGGGCATCCACGACCAGGGCTGGA 177900 Query 38059 GCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| || | |||||| ||||| |||||||||||| |||| || Sbjct 177899 AGGAGCGCGAAATATTCGGCAAAATTCGCTACATGAACTACGACGGCTG 177851 Score = 120 bits (132), Expect = 2e-22 Identities = 203/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 37821 GCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAG 37880 ||||| |||||||| | ||||||| ||||| || | ||| | |||||||||| ||| Sbjct 180019 GCCGAAACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAAG 179960 Query 37881 ATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCT 37940 ||||| | | |||||||||| ||| ||||| || |||| ||| | | | || Sbjct 179959 ATGCACGGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGAC-GCGAACGCC 179901 Query 37941 C-AGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGA 37999 || |||||| | ||||| || || || ||| ||||| |||||||||| || Sbjct 179900 GGAGGAGGCGCTCGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGA 179841 Query 38000 TCCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGC 38058 || ||||| |||||||| || ||||||| || |||||| | ||||| | |||| Sbjct 179840 CCCGAACGGGTACGTCGGGTGCATGTGGTCGATC-GCGGGCATCCACGACCAGGGCTGGA 179782 Query 38059 GCGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTACAACGGATG 38107 ||| || | |||||| ||||| |||||||||||| |||| || Sbjct 179781 AGGAGCGCGAAATATTCGGCAAAATTCGCTACATGAACTACGACGGCTG 179733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396896100960730