Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq27055 95.1 3e-14
seq26551 89.7 1e-12
>seq27055
Length=447146
Score = 95.1 bits (104), Expect = 3e-14
Identities = 270/412 (66%), Gaps = 10/412 (2%)
Strand=Plus/Minus
Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313
|| |||| | | ||||| || |||| ||| || |||||||| || || ||| || | |
Sbjct 54356 GGGTTGTGATTCGGGATCTTCGTCGCCCACCCCGTACCGATACCGTCCGCACCGTTGATC 54297
Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373
|| | |||| | | |||| ||| | | || |||||| | ||| || |||
Sbjct 54296 AGCAGCATCGGCACGATCGGCAGATACCAAACCGGCTCGATCCGCTGGTTGTCCTCGTAC 54237
Query 297374 AGATATTTCAGAAGATTATCGTCC---GTATCGACGAAAACCTGTCGAGTCTGAGGGTTC 297430
|||| | ||| || ||||||| | || || || | || ||| | | |
Sbjct 54236 TGATACTCCAGCAGCGGATCGTCCAGCGGATGGAAGATGCAC---CGCGTCAGTGTCGAC 54180
Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490
| | ||||| || || | | ||| ||| |||||| ||||| ||| | || ||||
Sbjct 54179 ATCATCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCG 54120
Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550
||||| || |||| |||| | |||||||| ||||| ||||| || | ||| || |||
Sbjct 54119 AACTGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGG 54060
Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACG 297610
|||||||| ||| || || |||||| ||||| |||||| || || ||
Sbjct 54059 TTCACGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 54000
Query 297611 TAACCGCTGAACTGTGCAACCTTCAC--GTCGGTCGTCAAATTGCGCTTGAA 297660
|||| | ||| || |||||||| ||| | ||| ||| ||||||||
Sbjct 53999 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTC--ATTACGCTTGAA 53950
Score = 95.1 bits (104), Expect = 3e-14
Identities = 270/412 (66%), Gaps = 10/412 (2%)
Strand=Plus/Plus
Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313
|| |||| | | ||||| || |||| ||| || |||||||| || || ||| || | |
Sbjct 65425 GGGTTGTGATTCGGGATCTTCGTCGCCCACCCCGTACCGATACCGTCCGCACCGTTGATC 65484
Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373
|| | |||| | | |||| ||| | | || |||||| | ||| || |||
Sbjct 65485 AGCAGCATCGGCACGATCGGCAGATACCAAACCGGCTCGATCCGCTGGTTGTCCTCGTAC 65544
Query 297374 AGATATTTCAGAAGATTATCGTCC---GTATCGACGAAAACCTGTCGAGTCTGAGGGTTC 297430
|||| | ||| || ||||||| | || || || | || ||| | | |
Sbjct 65545 TGATACTCCAGCAGCGGATCGTCCAGCGGATGGAAGATGCAC---CGCGTCAGTGTCGAC 65601
Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490
| | ||||| || || | | ||| ||| |||||| ||||| ||| | || ||||
Sbjct 65602 ATCATCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCG 65661
Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550
||||| || |||| |||| | |||||||| ||||| ||||| || | ||| || |||
Sbjct 65662 AACTGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGG 65721
Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACG 297610
|||||||| ||| || || |||||| ||||| |||||| || || ||
Sbjct 65722 TTCACGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 65781
Query 297611 TAACCGCTGAACTGTGCAACCTTCAC--GTCGGTCGTCAAATTGCGCTTGAA 297660
|||| | ||| || |||||||| ||| | ||| ||| ||||||||
Sbjct 65782 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTC--ATTACGCTTGAA 65831
>seq26551
Length=145895
Score = 89.7 bits (98), Expect = 1e-12
Identities = 263/403 (65%), Gaps = 2/403 (0%)
Strand=Plus/Minus
Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464
||| ||||| |||| ||| |||| || || ||| || | || |||| ||||| ||
Sbjct 15938 CCAGGCGTCCACGTCCGAGCTGTACGGGAAGGTGGTGGAGACGCCGCAGAACGAAAAGAC 15879
Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524
|| || ||||| || || |||| ||||||| |||||| || ||||| |
Sbjct 15878 ACCATTCTATCCGCGCTCGCCGTACGCATGTGCAAAGATGTACGGCTACTGGATAGTGAT 15819
Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584
|| || || ||| |||| || |||| | |||||| ||| ||||| ||||||
Sbjct 15818 CAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGATCCTGTTCAACCACGAGTC 15759
Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644
||| | || | | || ||||| || || ||||| ||| ||||| ||||
Sbjct 15758 ACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCCGCTCGGTGGCGAAGATTTC 15699
Query 68645 CAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATA 68704
||| | | ||| | | || |||||| | ||| | || | || ||||| |
Sbjct 15698 GCTCGGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCCA 15639
Query 68705 TGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTA 68764
|| || || ||||| || || |||||||||||| |||| || || ||||| || |
Sbjct 15638 CGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCAGCAGGAGCAGCCGGAAGATTT 15579
Query 68765 TGTGATTGCAACAGG-GAAAACAACGAGCGTTCGTGAGTTCGT 68806
||| || || || || |||| || | || |||||||| ||
Sbjct 15578 TGTCATCGCGACGGGCGAAACGCACTCG-GTGCGTGAGTTTGT 15537
Score = 89.7 bits (98), Expect = 1e-12
Identities = 263/403 (65%), Gaps = 2/403 (0%)
Strand=Plus/Minus
Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464
||| ||||| |||| ||| |||| || || ||| || | || |||| ||||| ||
Sbjct 17304 CCAGGCGTCCACGTCCGAGCTGTACGGGAAGGTGGTGGAGACGCCGCAGAACGAAAAGAC 17245
Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524
|| || ||||| || || |||| ||||||| |||||| || ||||| |
Sbjct 17244 ACCATTCTATCCGCGCTCGCCGTACGCATGTGCAAAGATGTACGGCTACTGGATAGTGAT 17185
Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584
|| || || ||| |||| || |||| | |||||| ||| ||||| ||||||
Sbjct 17184 CAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGATCCTGTTCAACCACGAGTC 17125
Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644
||| | || | | || ||||| || || ||||| ||| ||||| ||||
Sbjct 17124 ACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCCGCTCGGTGGCGAAGATTTC 17065
Query 68645 CAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATA 68704
||| | | ||| | | || |||||| | ||| | || | || ||||| |
Sbjct 17064 GCTCGGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCCA 17005
Query 68705 TGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTA 68764
|| || || ||||| || || |||||||||||| |||| || || ||||| || |
Sbjct 17004 CGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCAGCAGGAGCAGCCGGAAGATTT 16945
Query 68765 TGTGATTGCAACAGG-GAAAACAACGAGCGTTCGTGAGTTCGT 68806
||| || || || || |||| || | || |||||||| ||
Sbjct 16944 TGTCATCGCGACGGGCGAAACGCACTCG-GTGCGTGAGTTTGT 16903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102394400212750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |