Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq27055 95.1 3e-14 seq26551 89.7 1e-12 >seq27055 Length=447146 Score = 95.1 bits (104), Expect = 3e-14 Identities = 270/412 (66%), Gaps = 10/412 (2%) Strand=Plus/Minus Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313 || |||| | | ||||| || |||| ||| || |||||||| || || ||| || | | Sbjct 54356 GGGTTGTGATTCGGGATCTTCGTCGCCCACCCCGTACCGATACCGTCCGCACCGTTGATC 54297 Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373 || | |||| | | |||| ||| | | || |||||| | ||| || ||| Sbjct 54296 AGCAGCATCGGCACGATCGGCAGATACCAAACCGGCTCGATCCGCTGGTTGTCCTCGTAC 54237 Query 297374 AGATATTTCAGAAGATTATCGTCC---GTATCGACGAAAACCTGTCGAGTCTGAGGGTTC 297430 |||| | ||| || ||||||| | || || || | || ||| | | | Sbjct 54236 TGATACTCCAGCAGCGGATCGTCCAGCGGATGGAAGATGCAC---CGCGTCAGTGTCGAC 54180 Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490 | | ||||| || || | | ||| ||| |||||| ||||| ||| | || |||| Sbjct 54179 ATCATCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCG 54120 Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550 ||||| || |||| |||| | |||||||| ||||| ||||| || | ||| || ||| Sbjct 54119 AACTGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGG 54060 Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACG 297610 |||||||| ||| || || |||||| ||||| |||||| || || || Sbjct 54059 TTCACGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 54000 Query 297611 TAACCGCTGAACTGTGCAACCTTCAC--GTCGGTCGTCAAATTGCGCTTGAA 297660 |||| | ||| || |||||||| ||| | ||| ||| |||||||| Sbjct 53999 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTC--ATTACGCTTGAA 53950 Score = 95.1 bits (104), Expect = 3e-14 Identities = 270/412 (66%), Gaps = 10/412 (2%) Strand=Plus/Plus Query 297254 GGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACC 297313 || |||| | | ||||| || |||| ||| || |||||||| || || ||| || | | Sbjct 65425 GGGTTGTGATTCGGGATCTTCGTCGCCCACCCCGTACCGATACCGTCCGCACCGTTGATC 65484 Query 297314 AGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATAC 297373 || | |||| | | |||| ||| | | || |||||| | ||| || ||| Sbjct 65485 AGCAGCATCGGCACGATCGGCAGATACCAAACCGGCTCGATCCGCTGGTTGTCCTCGTAC 65544 Query 297374 AGATATTTCAGAAGATTATCGTCC---GTATCGACGAAAACCTGTCGAGTCTGAGGGTTC 297430 |||| | ||| || ||||||| | || || || | || ||| | | | Sbjct 65545 TGATACTCCAGCAGCGGATCGTCCAGCGGATGGAAGATGCAC---CGCGTCAGTGTCGAC 65601 Query 297431 AGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCG 297490 | | ||||| || || | | ||| ||| |||||| ||||| ||| | || |||| Sbjct 65602 ATCATCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCG 65661 Query 297491 AACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGG 297550 ||||| || |||| |||| | |||||||| ||||| ||||| || | ||| || ||| Sbjct 65662 AACTGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGG 65721 Query 297551 TTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACG 297610 |||||||| ||| || || |||||| ||||| |||||| || || || Sbjct 65722 TTCACGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 65781 Query 297611 TAACCGCTGAACTGTGCAACCTTCAC--GTCGGTCGTCAAATTGCGCTTGAA 297660 |||| | ||| || |||||||| ||| | ||| ||| |||||||| Sbjct 65782 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTC--ATTACGCTTGAA 65831 >seq26551 Length=145895 Score = 89.7 bits (98), Expect = 1e-12 Identities = 263/403 (65%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| ||||| |||| ||| |||| || || ||| || | || |||| ||||| || Sbjct 15938 CCAGGCGTCCACGTCCGAGCTGTACGGGAAGGTGGTGGAGACGCCGCAGAACGAAAAGAC 15879 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || ||||| || || |||| ||||||| |||||| || ||||| | Sbjct 15878 ACCATTCTATCCGCGCTCGCCGTACGCATGTGCAAAGATGTACGGCTACTGGATAGTGAT 15819 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || || || ||| |||| || |||| | |||||| ||| ||||| |||||| Sbjct 15818 CAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGATCCTGTTCAACCACGAGTC 15759 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644 ||| | || | | || ||||| || || ||||| ||| ||||| |||| Sbjct 15758 ACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCCGCTCGGTGGCGAAGATTTC 15699 Query 68645 CAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATA 68704 ||| | | ||| | | || |||||| | ||| | || | || ||||| | Sbjct 15698 GCTCGGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCCA 15639 Query 68705 TGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTA 68764 || || || ||||| || || |||||||||||| |||| || || ||||| || | Sbjct 15638 CGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCAGCAGGAGCAGCCGGAAGATTT 15579 Query 68765 TGTGATTGCAACAGG-GAAAACAACGAGCGTTCGTGAGTTCGT 68806 ||| || || || || |||| || | || |||||||| || Sbjct 15578 TGTCATCGCGACGGGCGAAACGCACTCG-GTGCGTGAGTTTGT 15537 Score = 89.7 bits (98), Expect = 1e-12 Identities = 263/403 (65%), Gaps = 2/403 (0%) Strand=Plus/Minus Query 68405 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 68464 ||| ||||| |||| ||| |||| || || ||| || | || |||| ||||| || Sbjct 17304 CCAGGCGTCCACGTCCGAGCTGTACGGGAAGGTGGTGGAGACGCCGCAGAACGAAAAGAC 17245 Query 68465 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 68524 || || ||||| || || |||| ||||||| |||||| || ||||| | Sbjct 17244 ACCATTCTATCCGCGCTCGCCGTACGCATGTGCAAAGATGTACGGCTACTGGATAGTGAT 17185 Query 68525 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACGAGAG 68584 || || || ||| |||| || |||| | |||||| ||| ||||| |||||| Sbjct 17184 CAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGATCCTGTTCAACCACGAGTC 17125 Query 68585 TCCCAACAGAGGCCATCAGTTCGTGACTCGTAAAATCACGAAGGTGGTCGCGAATATTTT 68644 ||| | || | | || ||||| || || ||||| ||| ||||| |||| Sbjct 17124 ACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCCGCTCGGTGGCGAAGATTTC 17065 Query 68645 CAATGGTGTCGAAAAATGCATGTATCTCGGTAATATAGATGCCAAAAGAGATTGGGGATA 68704 ||| | | ||| | | || |||||| | ||| | || | || ||||| | Sbjct 17064 GCTCGGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGATTCGAAGCGCGACTGGGGCCA 17005 Query 68705 TGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTA 68764 || || || ||||| || || |||||||||||| |||| || || ||||| || | Sbjct 17004 CGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCAGCAGGAGCAGCCGGAAGATTT 16945 Query 68765 TGTGATTGCAACAGG-GAAAACAACGAGCGTTCGTGAGTTCGT 68806 ||| || || || || |||| || | || |||||||| || Sbjct 16944 TGTCATCGCGACGGGCGAAACGCACTCG-GTGCGTGAGTTTGT 16903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102394400212750