Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq26551 120 4e-22 seq27055 100 3e-16 >seq26551 Length=145895 Score = 120 bits (132), Expect = 4e-22 Identities = 253/367 (69%), Gaps = 8/367 (2%) Strand=Plus/Minus Query 8571 CCTCAAAATGAGGAGACACCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TG 8628 || || || || ||||||| |||||||| || || || | | | | ||||| | | Sbjct 15895 CCGCAGAACGAAAAGACACCATTCTATCCGCGCTCGCCGTACG-CATGTGCAAAGATGTA 15837 Query 8629 CGGCACATTGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTA 8688 |||| | ||| | |||| || || || || | || | | || || ||| ||| | Sbjct 15836 CGGCT-ACTGGATAGTGATCAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGA 15778 Query 8689 TTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA-CC 8747 | || |||||||||||||||||||| || || | |||| ||||| ||||||| || Sbjct 15777 TCCTGTTCAACCACGAGTCACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCC 15718 Query 8748 GAT-GGTATCAAACAAATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAA 8806 | | ||| | || | ||| | | ||| || ||||| | | || |||| || ||| | Sbjct 15717 GCTCGGTGGCGAAGATTTCG-CTC-GGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGA 15660 Query 8807 CGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCA 8866 | || | |||||||| |||||||| ||||| ||||| || |||||| | | | || Sbjct 15659 TTCGAAGCGCGACTGGGGCCACGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCA 15600 Query 8867 ACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTT 8926 || || || |||| || | |||| |||||||||| || || ||||| || | ||||| Sbjct 15599 GCAGGAGCAGCCGGAAGATTTTGTCATCGCGACGGGCGAAACGCACTCGGTGCGTGAGTT 15540 Query 8927 CGTTGAG 8933 || ||| Sbjct 15539 TGTCGAG 15533 Score = 120 bits (132), Expect = 4e-22 Identities = 253/367 (69%), Gaps = 8/367 (2%) Strand=Plus/Minus Query 8571 CCTCAAAATGAGGAGACACCCTTCTATCCACGATCCGTCTATGGCGTCT-CAAAGGT-TG 8628 || || || || ||||||| |||||||| || || || | | | | ||||| | | Sbjct 17261 CCGCAGAACGAAAAGACACCATTCTATCCGCGCTCGCCGTACG-CATGTGCAAAGATGTA 17203 Query 8629 CGGCACATTGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTA 8688 |||| | ||| | |||| || || || || | || | | || || ||| ||| | Sbjct 17202 CGGCT-ACTGGATAGTGATCAACTATCGCGAGGCGTACAATATGTTCGCCTGCAACGGGA 17144 Query 8689 TTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA-CC 8747 | || |||||||||||||||||||| || || | |||| ||||| ||||||| || Sbjct 17143 TCCTGTTCAACCACGAGTCACCCCGGCGGGGTGAGAATTTTGTGACGCGCAAGATCACCC 17084 Query 8748 GAT-GGTATCAAACAAATCGTCGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAA 8806 | | ||| | || | ||| | | ||| || ||||| | | || |||| || ||| | Sbjct 17083 GCTCGGTGGCGAAGATTTCG-CTC-GGTCAGCAGGAGTGCGTCGAGCTGGGTAATCTCGA 17026 Query 8807 CGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCA 8866 | || | |||||||| |||||||| ||||| ||||| || |||||| | | | || Sbjct 17025 TTCGAAGCGCGACTGGGGCCACGCCAAAGACTACGTTGAGGCGATGTGGTTGATGATGCA 16966 Query 8867 ACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTT 8926 || || || |||| || | |||| |||||||||| || || ||||| || | ||||| Sbjct 16965 GCAGGAGCAGCCGGAAGATTTTGTCATCGCGACGGGCGAAACGCACTCGGTGCGTGAGTT 16906 Query 8927 CGTTGAG 8933 || ||| Sbjct 16905 TGTCGAG 16899 >seq27055 Length=447146 Score = 100 bits (110), Expect = 3e-16 Identities = 201/294 (68%), Gaps = 12/294 (4%) Strand=Plus/Minus Query 171881 GTGAAGATGTACCTCGTTTGA--GACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAAT 171937 |||||||||||||||| || | ||| ||| |||||||| | | ||||| || || Sbjct 54173 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 54117 Query 171938 TGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 171997 ||||| | ||| || |||||||| ||||| ||| | ||||| | |||| || Sbjct 54116 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 54057 Query 171998 ACAATCGTATCCGCG---AGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACA 172054 || ||||| || | || || ||| ||||| |||||||| ||| | ||||| || Sbjct 54056 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 54000 Query 172055 TACGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATAC 172114 | |||||| ||| |||||||||| ||| |||| || | |||||| | || Sbjct 53999 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 53940 Query 172115 ATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 | ||||| | ||| ||||| |||||||| |||| || ||| || ||| Sbjct 53939 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATGGACGGGATCGACCGC 53886 Score = 100 bits (110), Expect = 3e-16 Identities = 201/294 (68%), Gaps = 12/294 (4%) Strand=Plus/Plus Query 171881 GTGAAGATGTACCTCGTTTGA--GACGC-ATCTTTGCCACCCATGAGACGCGTCCCAAAT 171937 |||||||||||||||| || | ||| ||| |||||||| | | ||||| || || Sbjct 65608 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 65664 Query 171938 TGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAACTTG 171997 ||||| | ||| || |||||||| ||||| ||| | ||||| | |||| || Sbjct 65665 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 65724 Query 171998 ACAATCGTATCCGCG---AGGGAGACTTCACCGTGATGGTAGGCCGACTTGTCCGCGACA 172054 || ||||| || | || || ||| ||||| |||||||| ||| | ||||| || Sbjct 65725 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 65781 Query 172055 TACGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGCATAC 172114 | |||||| ||| |||||||||| ||| |||| || | |||||| | || Sbjct 65782 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 65841 Query 172115 ATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGCGCGATGGAACGC 172168 | ||||| | ||| ||||| |||||||| |||| || ||| || ||| Sbjct 65842 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATGGACGGGATCGACCGC 65895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597096999294200