Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2173 118 1e-21 >seq2173 Length=41539 Score = 118 bits (130), Expect = 1e-21 Identities = 386/592 (65%), Gaps = 12/592 (2%) Strand=Plus/Minus Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730 |||||| || || || ||| |||| |||| || || || |||||||| |||||||| Sbjct 18573 TTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCC 18514 Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGG 153790 || |||| || ||||| | ||| | ||||| || | || | | || Sbjct 18513 AGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCGG 18454 Query 153791 CTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGC 153850 | ||| | | ||| |||||||| ||| |||||||| || || || ||||| || Sbjct 18453 TTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGC 18394 Query 153851 CATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGT 153909 ||| | || || ||||| || | || ||||| || |||||||| | | | | Sbjct 18393 CATCTGGATGCACGTTTTCACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCGCACTT 18335 Query 153910 CGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCA 153969 | | ||||| | || || ||||| | ||| | || | || | || || Sbjct 18334 CCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCA 18275 Query 153970 TGTGGTCGTCGTACAAAT--TTAGTCGACATAAATCTTCAACCAAGTGCTGGTTAATTAC 154027 | | ||||| ||| | | || | || | || | | || ||| ||||| | || Sbjct 18274 TATCATCGTCCCACAGACCGTGCGTGGTCAGA--TCCTTGATCAGGTGGTGGTTCACCAC 18217 Query 154028 TTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGA 154087 ||||| ||||| | || ||||| || || | ||| || ||||||||||||| Sbjct 18216 CTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGA 18157 Query 154088 TTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGA 154147 ||||||||||| || ||||| || || | || || ||||| ||| | || || || Sbjct 18156 CTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGA 18097 Query 154148 GTTTCGCAAACCGTGTTTTGCAATGCGCAATT--TTAAATCT-GCCCAATTCCACAAGTT 154204 ||| |||| ||||||||| ||||| | || || | | ||||||||||||| || Sbjct 18096 GTTGCGCACACCGTGTTTGGCAAT---CTTTTCCTTCAGCGTCGCCCAATTCCACAGGTC 18040 Query 154205 GGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGA 154256 || ||| | ||||||||||||||| |||| || ||| ||| ||||| Sbjct 18039 CGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGA 17988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499430171330600