Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 118 1e-21
>seq2173
Length=41539
Score = 118 bits (130), Expect = 1e-21
Identities = 386/592 (65%), Gaps = 12/592 (2%)
Strand=Plus/Minus
Query 153671 TTTGTCCACGGTAAATGCGATTGCATCCGCGGCCGGTTTAGTTCGCAAATAATACATGCC 153730
|||||| || || || ||| |||| |||| || || || |||||||| ||||||||
Sbjct 18573 TTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCC 18514
Query 153731 GGTTTTCAAACCACGTTTCCAAGTGTGCATGTGCACGCTAGTTAATAACGCGAAACTGGG 153790
|| |||| || ||||| | ||| | ||||| || | || | | ||
Sbjct 18513 AGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCGG 18454
Query 153791 CTGCGCTATAAACACGTTAAACGACTGGCTCTGATCGATGAAAGCGCCGCGATCGGCCGC 153850
| ||| | | ||| |||||||| ||| |||||||| || || || ||||| ||
Sbjct 18453 TTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGC 18394
Query 153851 CATGTCAAT-CAAGTTTTTACTGCTCATTTCCCACACAGTTTTGTAGACGGCTTTAATGT 153909
||| | || || ||||| || | || ||||| || |||||||| | | | |
Sbjct 18393 CATCTGGATGCACGTTTTCACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCGCACTT 18335
Query 153910 CGTCGGGTATGCGATCAATTTTCTGCACACTGCCTCCGGCCGCTATAATGGAATTGCGCA 153969
| | ||||| | || || ||||| | ||| | || | || | || ||
Sbjct 18334 CCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCA 18275
Query 153970 TGTGGTCGTCGTACAAAT--TTAGTCGACATAAATCTTCAACCAAGTGCTGGTTAATTAC 154027
| | ||||| ||| | | || | || | || | | || ||| ||||| | ||
Sbjct 18274 TATCATCGTCCCACAGACCGTGCGTGGTCAGA--TCCTTGATCAGGTGGTGGTTCACCAC 18217
Query 154028 TTGAAAATCGCCGGCCAATACGCGGCGCACATACAAATTGCTGGTGAACGGCTCGAACGA 154087
||||| ||||| | || ||||| || || | ||| || |||||||||||||
Sbjct 18216 CTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGA 18157
Query 154088 TTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATATACGCCACCAACAAAGA 154147
||||||||||| || ||||| || || | || || ||||| ||| | || || ||
Sbjct 18156 CTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGA 18097
Query 154148 GTTTCGCAAACCGTGTTTTGCAATGCGCAATT--TTAAATCT-GCCCAATTCCACAAGTT 154204
||| |||| ||||||||| ||||| | || || | | ||||||||||||| ||
Sbjct 18096 GTTGCGCACACCGTGTTTGGCAAT---CTTTTCCTTCAGCGTCGCCCAATTCCACAGGTC 18040
Query 154205 GGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTCGCCGGA 154256
|| ||| | ||||||||||||||| |||| || ||| ||| |||||
Sbjct 18039 CGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGA 17988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499430171330600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |