Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq18130 123 2e-23 seq1 87.8 1e-12 >seq18130 Length=369112 Score = 123 bits (136), Expect = 2e-23 Identities = 333/503 (66%), Gaps = 6/503 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 || || ||||||||||||| ||| | ||| ||| ||||||| ||| || |||||||| Sbjct 342630 GCAGGATTCGGTGTGACGGGCGGTGCCCACCGGCTGTGGACGCACCGGGCGTACAAGGCG 342571 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || || | ||||| | |||| || || | || ||||||| | Sbjct 342570 AAGCTGCCGCTCCGGATCATCCTGATGTGCTGCTACTGTATGTCCGGCCAGAACAGTCTG 342511 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| ||||||| | | |||||||||||||| || ||| || ||||| Sbjct 342510 TTCGATTGGGTGCGCGATCACCGCATCCACCACAAGTACTCGGAGACGGACGCGGACCCG 342451 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||| | ||| | ||||||| | | ||||||| || ||||| |||| |||| || Sbjct 342450 CACAACTCGAACCGTGGGTTCTTCTACGCGCACGTCGGCTGGCTGCTGATCCGCAAGCAC 342391 Query 108580 CCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGT 108638 || || ||| ||| | || || || |||||| ||||| | | |||| ||||| Sbjct 342390 CCGGA-GTGCATCAAGAAGGGCCGGCTGATCGACATGTCGGACGTGTCGGCCGACCCGGT 342332 Query 108639 GGTAGTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACC 108698 | || ||| ||||||||| || || || || || || | | || Sbjct 342331 CATCAAGTTCCACGAGCGGTACTTTATGGGGCTGAAGATCCTGTTCACGTTCATCGTGCC 342272 Query 108699 GGTGTGGGTGCCGGTCGCGTGTT--GGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAG 108756 | || || || || || |||| ||| ||| || || | | |||||| | | Sbjct 342271 GTCGTTCGTACC-GTGGC-TGTTCCTGGGCGAGCCGCTCTACCTGTCCTTCCTGGCGAAC 342214 Query 108757 GCCGTTCTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCAC 108816 | | ||| |||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 342213 TGCCTGCTGCGGTACGTGCTGACGCTGAACTTCACGTGGCTGGTGAACAGTGCGGCCCAC 342154 Query 108817 ATGTACGGCGACCGTCCGTTCGA 108839 || |||||| || |||| ||| Sbjct 342153 ATCTACGGCAACAAGCCGTACGA 342131 Score = 123 bits (136), Expect = 2e-23 Identities = 333/503 (66%), Gaps = 6/503 (1%) Strand=Plus/Plus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 || || ||||||||||||| ||| | ||| ||| ||||||| ||| || |||||||| Sbjct 355251 GCAGGATTCGGTGTGACGGGCGGTGCCCACCGGCTGTGGACGCACCGGGCGTACAAGGCG 355310 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || || | ||||| | |||| || || | || ||||||| | Sbjct 355311 AAGCTGCCGCTCCGGATCATCCTGATGTGCTGCTACTGTATGTCCGGCCAGAACAGTCTG 355370 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCA 108519 | ||||||| ||||||| | | |||||||||||||| || ||| || ||||| Sbjct 355371 TTCGATTGGGTGCGCGATCACCGCATCCACCACAAGTACTCGGAGACGGACGCGGACCCG 355430 Query 108520 CACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGAC 108579 |||||| | ||| | ||||||| | | ||||||| || ||||| |||| |||| || Sbjct 355431 CACAACTCGAACCGTGGGTTCTTCTACGCGCACGTCGGCTGGCTGCTGATCCGCAAGCAC 355490 Query 108580 CCCGACGTG-ATCTCGGCCGGTCGAAAAATGGACATGACGGACATATACTCCGATCCGGT 108638 || || ||| ||| | || || || |||||| ||||| | | |||| ||||| Sbjct 355491 CCGGA-GTGCATCAAGAAGGGCCGGCTGATCGACATGTCGGACGTGTCGGCCGACCCGGT 355549 Query 108639 GGTAGTGTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGTTATACC 108698 | || ||| ||||||||| || || || || || || | | || Sbjct 355550 CATCAAGTTCCACGAGCGGTACTTTATGGGGCTGAAGATCCTGTTCACGTTCATCGTGCC 355609 Query 108699 GGTGTGGGTGCCGGTCGCGTGTT--GGGGGGAGACGTTCGCGGCGGCGTTCCTGTCTCAG 108756 | || || || || || |||| ||| ||| || || | | |||||| | | Sbjct 355610 GTCGTTCGTACC-GTGGC-TGTTCCTGGGCGAGCCGCTCTACCTGTCCTTCCTGGCGAAC 355667 Query 108757 GCCGTTCTGAGGTACGCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCAC 108816 | | ||| |||||| || || || ||||| ||||||||||| || ||||| ||| Sbjct 355668 TGCCTGCTGCGGTACGTGCTGACGCTGAACTTCACGTGGCTGGTGAACAGTGCGGCCCAC 355727 Query 108817 ATGTACGGCGACCGTCCGTTCGA 108839 || |||||| || |||| ||| Sbjct 355728 ATCTACGGCAACAAGCCGTACGA 355750 Score = 100 bits (110), Expect = 2e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | ||||||||||||||||||||||||||||||||||| | ||||||||||| | Sbjct 345698 TGGCCATGGGCGAGGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGG 345639 Query 108941 CCGAGTTGGGGAACGACT 108958 |||||||||| ||| ||| Sbjct 345638 CCGAGTTGGGTAACTACT 345621 Score = 95.1 bits (104), Expect = 9e-15 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 108340 GCCGGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGCC 108399 ||||||||||| ||||| | || || || ||| | ||| ||| | |||||||| Sbjct 349638 GCCGGGTTCGGCGTGACCGGTGGGGTGCACCGGCTCTGGTGCCATCGGTCGTACAAGGCG 349579 Query 108400 ACCGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATC 108459 | ||| || | | |||| | |||| |||| | || || |||||||| ||| Sbjct 349578 AAGCTGCCGCTCCGCATCATCCTCATGTGCTGCTACTCGATCGCCGGCCAGAACACGATC 349519 Query 108460 CCGCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACG-ACGGCCGACCC 108518 | ||||| | || ||| | | |||||||||||||| || ||| |||| || || Sbjct 349518 TACGACTGGGTCCGGGACCACCGCATCCACCACAAGTACTCGGAAACGGACGGT-GATCC 349460 Query 108519 ACACAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGA 108578 ||||||||| ||| |||| ||| || | ||||||| || ||||| ||| | |||| | Sbjct 349459 ACACAACGCGAACCGGGGCTTCCTGTACGCGCACGTCGGCTGGCTGATGCTTCGCAAGCA 349400 Query 108579 CCCCGA 108584 ||| || Sbjct 349399 CCCGGA 349394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 108881 TGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCG 108940 |||| | |||||||| ||||||||||||||||| |||||||| | ||||||||||| | Sbjct 352112 TGGCCATGGGCGAGGGTTGGCACAACTACCACCATGTGTTCCCGTGGGACTACAAGGCGG 352171 Query 108941 CCGAGTTGGGGAACGACT 108958 |||||||||| ||| ||| Sbjct 352172 CCGAGTTGGGTAACTACT 352189 Score = 82.4 bits (90), Expect = 6e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 || || ||||||||||||||||||||||||||||| | ||||||||||| |||||| || Sbjct 341896 GGTGAAGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCCGAGATG 341837 Query 108949 GGGAACGACT 108958 || || ||| Sbjct 341836 GGCCACTACT 341827 Score = 82.4 bits (90), Expect = 6e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 108889 GGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTG 108948 || || ||||||||||||||||||||||||||||| | ||||||||||| |||||| || Sbjct 355985 GGTGAAGGATGGCACAACTACCACCACGTGTTCCCGTGGGACTACAAGGCGGCCGAGATG 356044 Query 108949 GGGAACGACT 108958 || || ||| Sbjct 356045 GGCCACTACT 356054 >seq1 Length=727209 Score = 87.8 bits (96), Expect = 1e-12 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 108870 GGTGGCGGCGTTGGCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGA 108929 |||||| |||| || | ||||| |||||||||||||| |||||||||||||| | || Sbjct 627024 GGTGGCTTCGTTCGCGTTTGGCGAAGGATGGCACAACTATCACCACGTGTTCCCGTGGGA 627083 Query 108930 CTACAAGGCCGCCGAGTTGGGGAACGAC 108957 ||||||| | |||||| |||| ||| || Sbjct 627084 CTACAAGACGGCCGAGCTGGGCAACTAC 627111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381612904603560