Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 477 1e-129
>seq2173
Length=41539
Score = 477 bits (528), Expect = 1e-129
Identities = 1223/1836 (67%), Gaps = 62/1836 (3%)
Strand=Plus/Minus
Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770
|| ||||| ||||||||||| |||||||| || || ||||| || | ||||| ||
Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCC-CATCTTCCACGCGTGGAA 18484
Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830
||| ||||| |||| | |||| |||||| ||||||| | || ||||| ||
Sbjct 18483 GTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGA 18424
Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTG-CCTTCATC 152888
||| || ||||| || |||||||| ||||||| || || |||||| || |||
Sbjct 18423 CTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA--CGTTTTCACCGAAATC 18366
Query 152889 TCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATA 152948
||||| | |||||||||| || || | |||||| || |||||||| ||
Sbjct 18365 TCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATC 18306
Query 152949 GAGCCCTTGTGTGCAAAAATAGCGTT--TCGTATT-TCGGGCGTGTACACGTTCAGTT-- 153003
||||| ||||| || | || | ||| || ||| ||| | ||| | ||
Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCC-----CACAGACCGTGCG 18251
Query 153004 TAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTC 153063
| | || || | ||||| || ||||| ||||| ||||||||||||| || || || |
Sbjct 18250 TGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCC 18191
Query 153064 TCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCG 153123
|| || ||| || | || || || || ||||| ||||| | ||||| ||||
Sbjct 18190 GGTTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCG 18131
Query 153124 TGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGT 153183
| | || |||||||| ||| | || || || || |||| ||||| ||| |
Sbjct 18130 TCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCT 18071
Query 153184 CGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACT 153243
||||||| || | ||||| |||||| ||| |||| | |||||||||||||||||
Sbjct 18070 TTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACT 18011
Query 153244 GTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGG 153303
| | | || || | ||| || | |||| ||| || || | ||
Sbjct 18010 GCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGG 17951
Query 153304 CCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGA 153363
||| ||||||||||| || ||||| || ||||| ||||| || || || | |||||
Sbjct 17950 CCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGA 17891
Query 153364 GAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGAC 153423
| ||| || | ||||||||||| | || || || | || || || |||| ||
Sbjct 17890 GCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATAC 17831
Query 153424 CCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGG 153483
|||||| |||| ||||| || || || | ||| |||| |||| || | |
Sbjct 17830 CCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCG 17771
Query 153484 GATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCT 153543
| ||| || |||||||| ||||| | ||||||| ||| | ||| | || | | |
Sbjct 17770 GGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTT 17711
Query 153544 TAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAG 153603
| || ||| |||||||||| || ||| ||| | ||| | |||| ||||| |
Sbjct 17710 TCAGCTTCGCGAAATCATACGTACGGTCG--GACTGG-ACGAACATGTTCAACGCAATCG 17654
Query 153604 ACGCCAGATTACAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGC 153658
| ||||| || || || ||| ||| ||||| || ||||| ||| |||||||
Sbjct 17653 AGGCCAGGTTGCACACCGCCACTTCGTC-CTTCGACGA----GTACTCCACAATCTCGGT 17599
Query 153659 GCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGC 153718
||| ||||| ||| || ||| ||| | |||||||| ||||||||||||||||||||
Sbjct 17598 GCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGC 17539
Query 153719 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCT 153775
||| ||| | |||||||||||| |||| ||||| || || | ||||| ||| |||||
Sbjct 17538 GTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACC- 17480
Query 153776 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGCTCTCGTATCGCTCG 153833
||| |||||||| ||| | || ||| |||||||||| |||| || | | |
Sbjct 17479 --ACAGATCCTGCGCCTTTACCTG--GCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTG 17424
Query 153834 TACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACAC 153893
|||| ||| ||||| ||||| | | ||||| | |||||||| | ||||| |||
Sbjct 17423 TACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCAC 17364
Query 153894 ATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGC 153953
|||| |||| | |||| || | ||||| |||||||||||||||| | |||||||
Sbjct 17363 ATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGC 17304
Query 153954 GCGTACATGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG 154012
||||| | | ||| || | | ||| |||||| ||| |||| ||||||| |
Sbjct 17303 GCGTAGAACATGTCCCGTG-CGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAA 17245
Query 154013 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC-- 154070
| | | | ||| ||||||| || || | ||||| ||| | ||||| |||
Sbjct 17244 AAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTT 17185
Query 154071 -TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAG 154129
|| |||||||||||||||| || || | |||||| | ||||||| ||| || |||
Sbjct 17184 ATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAA 17125
Query 154130 GCCGCTTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC 154187
||| | | | ||||| || || | ||| | | || || || | |||
Sbjct 17124 CCCGTTCGAAATTCCGTTCGTGCCGGA--GATGTACGTTCCCTTCGCCCGGATGCAGTGC 17067
Query 154188 ACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTG 154247
||||| | || ||||| ||| | |||| || || ||||| | |||||| |
Sbjct 17066 ACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCG 17007
Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307
|||||||| |||||||| |||||| | | |||| || || || ||| || |||
Sbjct 17006 TAGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGA 16947
Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTC--- 154364
|||| |||||| || | ||| || || || ||||| | ||||
Sbjct 16946 CGCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAA----GTAACGCTCCGA 16891
Query 154365 -ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGAC 154423
| || ||||| ||||| || | ||||| || ||| || ||||||| |||||
Sbjct 16890 GAGCAGATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGAC 16831
Query 154424 GCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTG---TCAATCTTCAAGAGATA 154480
|||||| ||||| |||||||| | || |||| | ||| | |||||||| | |||
Sbjct 16830 GCGCATCAGCATATGCTGCGGCC--TC-TCGACAATCTTGCCCTTGATCTTCAACAAATA 16774
Query 154481 TCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTA 154516
| || ||||||||| | |||||||| |||||
Sbjct 16773 CGAACGCTCCAGGGTTTTGAAGCCGAAATAGTTGTA 16738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496049224282800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |