Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2173 477 1e-129 >seq2173 Length=41539 Score = 477 bits (528), Expect = 1e-129 Identities = 1223/1836 (67%), Gaps = 62/1836 (3%) Strand=Plus/Minus Query 152712 GCAGGCTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCGCAGCG-CCACGAGTAATT 152770 || ||||| ||||||||||| |||||||| || || ||||| || | ||||| || Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCC-CATCTTCCACGCGTGGAA 18484 Query 152771 GTGAATCGAAGTCATCACAGCGTACGTCGGTTGCGCCACGAACAGATTAAACGATTGGCT 152830 ||| ||||| |||| | |||| |||||| ||||||| | || ||||| || Sbjct 18483 GTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGA 18424 Query 152831 CTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAAT-CATGCGTTTTG-CCTTCATC 152888 ||| || ||||| || |||||||| ||||||| || || |||||| || ||| Sbjct 18423 CTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA--CGTTTTCACCGAAATC 18366 Query 152889 TCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCAATGTTCTGAATA 152948 ||||| | |||||||||| || || | |||||| || |||||||| || Sbjct 18365 TCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATC 18306 Query 152949 GAGCCCTTGTGTGCAAAAATAGCGTT--TCGTATT-TCGGGCGTGTACACGTTCAGTT-- 153003 ||||| ||||| || | || | ||| || ||| ||| | ||| | || Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCC-----CACAGACCGTGCG 18251 Query 153004 TAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTC 153063 | | || || | ||||| || ||||| ||||| ||||||||||||| || || || | Sbjct 18250 TGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCC 18191 Query 153064 TCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCG 153123 || || ||| || | || || || || ||||| ||||| | ||||| |||| Sbjct 18190 GGTTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCG 18131 Query 153124 TGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGT 153183 | | || |||||||| ||| | || || || || |||| ||||| ||| | Sbjct 18130 TCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCT 18071 Query 153184 CGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACT 153243 ||||||| || | ||||| |||||| ||| |||| | ||||||||||||||||| Sbjct 18070 TTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACT 18011 Query 153244 GTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGG 153303 | | | || || | ||| || | |||| ||| || || | || Sbjct 18010 GCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGG 17951 Query 153304 CCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGA 153363 ||| ||||||||||| || ||||| || ||||| ||||| || || || | ||||| Sbjct 17950 CCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGA 17891 Query 153364 GAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGAC 153423 | ||| || | ||||||||||| | || || || | || || || |||| || Sbjct 17890 GCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATAC 17831 Query 153424 CCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGG 153483 |||||| |||| ||||| || || || | ||| |||| |||| || | | Sbjct 17830 CCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCG 17771 Query 153484 GATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCT 153543 | ||| || |||||||| ||||| | ||||||| ||| | ||| | || | | | Sbjct 17770 GGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTT 17711 Query 153544 TAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGCATCGATTCACGGCAATAG 153603 | || ||| |||||||||| || ||| ||| | ||| | |||| ||||| | Sbjct 17710 TCAGCTTCGCGAAATCATACGTACGGTCG--GACTGG-ACGAACATGTTCAACGCAATCG 17654 Query 153604 ACGCCAGATTACAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGC 153658 | ||||| || || || ||| ||| ||||| || ||||| ||| ||||||| Sbjct 17653 AGGCCAGGTTGCACACCGCCACTTCGTC-CTTCGACGA----GTACTCCACAATCTCGGT 17599 Query 153659 GCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGC 153718 ||| ||||| ||| || ||| ||| | |||||||| |||||||||||||||||||| Sbjct 17598 GCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGC 17539 Query 153719 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCT 153775 ||| ||| | |||||||||||| |||| ||||| || || | ||||| ||| ||||| Sbjct 17538 GTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACC- 17480 Query 153776 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGCTCTCGTATCGCTCG 153833 ||| |||||||| ||| | || ||| |||||||||| |||| || | | | Sbjct 17479 --ACAGATCCTGCGCCTTTACCTG--GCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTG 17424 Query 153834 TACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACAC 153893 |||| ||| ||||| ||||| | | ||||| | |||||||| | ||||| ||| Sbjct 17423 TACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCAC 17364 Query 153894 ATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGC 153953 |||| |||| | |||| || | ||||| |||||||||||||||| | ||||||| Sbjct 17363 ATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGC 17304 Query 153954 GCGTACATGAGGTCGCGCGCCTTGCA-ATCCTCCGCGCCCATGTTGCGTTTCAGATTGAG 154012 ||||| | | ||| || | | ||| |||||| ||| |||| ||||||| | Sbjct 17303 GCGTAGAACATGTCCCGTG-CGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAA 17245 Query 154013 CACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC-- 154070 | | | | ||| ||||||| || || | ||||| ||| | ||||| ||| Sbjct 17244 AAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTT 17185 Query 154071 -TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAG 154129 || |||||||||||||||| || || | |||||| | ||||||| ||| || ||| Sbjct 17184 ATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAA 17125 Query 154130 GCCGCTTGCGGTGCCGTTGGT--CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC 154187 ||| | | | ||||| || || | ||| | | || || || | ||| Sbjct 17124 CCCGTTCGAAATTCCGTTCGTGCCGGA--GATGTACGTTCCCTTCGCCCGGATGCAGTGC 17067 Query 154188 ACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTG 154247 ||||| | || ||||| ||| | |||| || || ||||| | |||||| | Sbjct 17066 ACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCG 17007 Query 154248 TAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGA 154307 |||||||| |||||||| |||||| | | |||| || || || ||| || ||| Sbjct 17006 TAGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGA 16947 Query 154308 ATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTC--- 154364 |||| |||||| || | ||| || || || ||||| | |||| Sbjct 16946 CGCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAA----GTAACGCTCCGA 16891 Query 154365 -ATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGAC 154423 | || ||||| ||||| || | ||||| || ||| || ||||||| ||||| Sbjct 16890 GAGCAGATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGAC 16831 Query 154424 GCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTG---TCAATCTTCAAGAGATA 154480 |||||| ||||| |||||||| | || |||| | ||| | |||||||| | ||| Sbjct 16830 GCGCATCAGCATATGCTGCGGCC--TC-TCGACAATCTTGCCCTTGATCTTCAACAAATA 16774 Query 154481 TCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTA 154516 | || ||||||||| | |||||||| ||||| Sbjct 16773 CGAACGCTCCAGGGTTTTGAAGCCGAAATAGTTGTA 16738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496049224282800