Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2173 268 9e-67 >seq2173 Length=41539 Score = 268 bits (296), Expect = 9e-67 Identities = 1212/1879 (65%), Gaps = 83/1879 (4%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 |||||| |||||||| |||| | |||| || || ||||||| |||||||||||| || Sbjct 18570 GTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCCAGT 18511 Query 145779 CTTGAGCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGGT 145836 ||| || ||| ||||| || ||||| || || || | ||| || | ||| Sbjct 18510 CTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCG--TAGTTCGGT 18453 Query 145837 TCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCC 145896 || || || | || | || || ||| || ||||| | | |||||||||| ||| Sbjct 18452 TCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGCC 18393 Query 145897 ATGTCTATCATGCAC--TTTGATTTAATT-TCCCATGCGGTTTTAAAGAGATCCTTGACG 145953 || | || |||| ||| | || | ||||| | ||||| | ||||| || Sbjct 18392 ATCTGGAT---GCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACT 18336 Query 145954 TGCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGC 146013 | || ||||||| || |||||||| | || || || | ||||| ||| |||| | Sbjct 18335 TCCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTC 18276 Query 146014 AATTC-TGG----AGTGTAAATGTTCAAGTCTACGAGGGCCTTGATGAGATACTGGTTGA 146068 | || | | | | | || | || | || ||||||| || | ||||| | Sbjct 18275 ATATCATCGTCCCACAG--ACCGTGC--GTGGTC-AGATCCTTGATCAGGTGGTGGTTCA 18221 Query 146069 CCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGA 146128 |||||||||||||||| | |||||||||| || |||||| || ||||||||| Sbjct 18220 CCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGA 18161 Query 146129 ACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCA 146188 ||||||||||||| || | || || ||||||| ||| || ||||| ||| | ||||| Sbjct 18160 ACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCA 18101 Query 146189 AAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCCGTAGTTTGGACCAATTCCACAAAT 146248 ||||| | ||| |||||| | |||||||||| || | | ||||||||||| Sbjct 18100 GTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACA--- 18044 Query 146249 GATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACAGGGGGCTAT 146308 | ||||| || | || | ||||||| |||| | |||| | || || Sbjct 18043 GGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACC 17984 Query 146309 TCTCGTACGATTCATAAGGACCGTCGATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCG 146368 |||||||| || || || || || ||||| ||||||||||||||||| || Sbjct 17983 CCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCAC 17924 Query 146369 AAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAG 146427 |||| |||||||| ||| | |||| ||| ||| |||||| | || ||||| Sbjct 17923 CGTAGTAGATGGTCTCAAATATCTGCTGATTGA-GCTTCTGCGCCTCCGCACTCTCGTAC 17865 Query 146428 GGGA----TATCGAGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACACCAACGGG 146483 |||| ||| ||| | || || || || | |||||| | |||| ||| | || Sbjct 17864 GGGAAGCCCATCAAGATG----AACGCATCAGCCATACCCTGGACGCCGATACCGATCGG 17809 Query 146484 GCGGTGTTTCTTGTT---ACTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTGCTGTCGAT 146540 ||||| | |||| | ||||| || ||| ||| ||| ||| |||||| Sbjct 17808 ACGGTGGCGCATGTTCGAGCGCTTCGC--TTCCGGCACCGGG-TAGAAGTTCACGTCGAT 17752 Query 146541 GATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACATAGTCAAA 146600 |||||||| | || ||| || ||||| | | |||||| | | ||| | Sbjct 17751 AATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATA 17692 Query 146601 TGTTTTAGTTTTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAAGTTACATACGGC 146660 | | | | || | |||| || |||| | || || ||||||| ||| || || || Sbjct 17691 CG--TACGGTCGGAC-TGGACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGC 17635 Query 146661 AGTCTCGTCCTT-GTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGA 146719 |||||||| | || | |||| ||||||||||| ||| ||||| |||||||||| Sbjct 17634 CACTTCGTCCTTCGACG-AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGG 17576 Query 146720 TGCCCAAAtttttttGGTTACTAAACTTG---TTGCAGGGGTCCTTGTAGAGCATGTACG 146776 |||| | |||| ||||| || ||| ||||| | ||||||||| |||||||||| Sbjct 17575 TGCCGATGTTTTGCTGGTTGCT---TTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 17519 Query 146777 GTCCCCCGGTTTCGACATTGGTCTCGACGAT--GAATCTAAACAAATCTCTG-GCCTTTA 146833 || | || || || || | || |||| ||| || | ||| ||| ||| ||||||| Sbjct 17518 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAAC--CACAGATC-CTGCGCCTTTA 17462 Query 146834 CTTGTCTTTCGTACAGTTTATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTAGAAC 146893 | || | | | | | ||| || || | |||||| | || || | Sbjct 17461 CCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGC 17402 Query 146894 CGTACTCGTCGAGGAGGCCGGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCT 146953 | || ||| | |||||| | | | || || | || ||| || ||| Sbjct 17401 CCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCG 17342 Query 146954 CCTTCACGCGTTCCATAAACAAATCGGGAATCCAAAG-GCCCAGCATCAAGTCGCGAGCC 147012 ||| |||||| | ||| |||| ||| |||||||| || || || | || ||| || || Sbjct 17341 CCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAG-AACATGTCCCGTGCG 17283 Query 147013 TTGGCGTCCTCGGAGCCCATGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGC 147072 | ||||| ||| |||| ||| | | | || | | || ||| Sbjct 17282 CGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGC 17223 Query 147073 CAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGACGTGG 147129 || ||||||| ||| ||| | || || |||||| |||||||||||||||| Sbjct 17222 CACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTAC 17163 Query 147130 CGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCG-CCGGATTT--TGTGGTG 147186 || || |||| ||| | || || | ||| | ||| | ||| || | || | ||| Sbjct 17162 CGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTG 17103 Query 147187 CC---GTTGTA------TTGAGCGCTGACGCTTTGCACGCTCAGCCCGAGACCTCCGCCC 147237 || | |||| | || | || || |||||| ||||||||| || ||| | Sbjct 17102 CCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCG-GC 17044 Query 147238 AGA-TTCGAAATCAAAGCGGACTCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTC 147296 ||| || || |||| ||| ||| | || || | ||||||||| ||||||||||| || Sbjct 17043 AGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTC 16984 Query 147297 CTTGATGCATTGCAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAG 147356 ||| |||| || || || ||| |||||||| ||| ||||||| |||| Sbjct 16983 GGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACAT 16924 Query 147357 CGTGGGGCTGGCGTGCGTGAACGT---GCCCAGACTCATCAATTGATACGTTTCAATGGC 147413 || || ||| || || || || || | || | || | |||||| || || || Sbjct 16923 GGTCGGCGAGGCATGGGT-AAAGTAACGCTCCGA--GAGCAGATTATACGTCTCGATCGC 16867 Query 147414 GCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCG 147473 | | ||| ||| || ||| | | |||||||||||| ||||| ||||| || | Sbjct 16866 AGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCT 16807 Query 147474 TTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAACCAA 147532 || ||||| | | |||| || || | ||| | | | | ||| |||||||| || | Sbjct 16806 CTCGACAATCTTGCCCTTGATCTTCAACAAATA-CGAACGCTCCAGGGTTTTGAAGCCGA 16748 Query 147533 AGTACTTGTAGTCGTAGTC 147551 | || ||||| || |||| Sbjct 16747 AATAGTTGTACCCGAAGTC 16729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475296542687600