Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 266 3e-66
>seq2173
Length=41539
Score = 266 bits (294), Expect = 3e-66
Identities = 927/1430 (65%), Gaps = 30/1430 (2%)
Strand=Plus/Plus
Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGG-ACGCGACATCGAAAACGCGAC 122974
|| |||||||| ||||||||||| || ||| | || || ||| |||||||| ||||
Sbjct 16813 CAGCATATGCTGATGCGCGTCGCCATCGGCATCCATGGCACG-GACATCGAGGCTGCGAT 16871
Query 122975 CGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGC 123034
||| || || || || | || | | || || || || || || |||||||
Sbjct 16872 CGAGACGTATAATCTGCTCTCGGAGCGTTACTTTACCCATGCCTCGCCGACCATGTTCGC 16931
Query 123035 CGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAG 123094
|| | ||| || || ||| |||| || || ||| |||| ||| || ||| |||||
Sbjct 16932 GGCGGCTACGCAGCGTCCCCAGCTGTCGTCTTGCTTTCTGCTGACCATGTCCGACGACAG 16991
Query 123095 CATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154
|||| || ||||| || || || | ||||| |||| ||||| | || ||| ||
Sbjct 16992 CATCGAAGGCATCTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCTGCCGGTGG 17051
Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGG 123214
||| || ||||||||||| | | | | |||| |||| |||| ||||
Sbjct 17052 CATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTACATCTCCGGCACGAACGG 17111
Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274
||| | |||| | | | |||||||| || ||||| ||| | | ||| |||||||
Sbjct 17112 AATTTCGAACGGGTTGGTGCCGATGCTGCGCGTGTACAACAACACGGCACGGTACGTCGA 17171
Query 123275 CCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331
||||||||| || || || ||| | || ||||| || || |||||||||| ||
Sbjct 17172 TCAGGGCGGCAATAAGCGGCCGGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGA 17231
Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391
||||| || ||||| || | || |||| || ||| || | || || ||
Sbjct 17232 TGTGTTTGAGTTTTTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCACGGGA 17291
Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGT 123451
|||| ||||| | ||| | || ||| |||| |||| ||||| | | |||
Sbjct 17292 CATGTTCTACGCGCTCTGGATTCCGGATCTGTTCATGCAGCGCGTGGAGGCGAACGAAAC 17351
Query 123452 GTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGT 123510
|||| | ||||| |||| || |||||||| ||| ||| | ||| | |||
Sbjct 17352 GTGGAGTTTGATGTG-CCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGT 17410
Query 123511 TTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCAC 123570
| || |||||||| || || ||| || ||| | | ||||| ||| |
Sbjct 17411 TCGAGAAGTTGTACACGGGCTATGAGAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGC 17470
Query 123571 GTGATTTGTTCAAATTT---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGC 123627
||| ||| ||| || |||||| | || || || || || ||||||||||
Sbjct 17471 AGGATCTGT---GGTTTGCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGC 17527
Query 123628 TCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTA 123687
| ||||| ||||| ||||| | |||| ||| ||| ||| | || || || || ||
Sbjct 17528 TGTACAAGGACGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGCACCATCAAGTGCT 17587
Query 123688 GTAATCTTTGCTCCGAAATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGTAA 123745
||| |||||| |||| ||| | || || | ||| | || ||||||| ||||| ||
Sbjct 17588 CTAACCTTTGCACCGAGATTGTGGAGTACTCGTCGAAG--GACGAAGTGGCGGTGTGCAA 17645
Query 123746 TTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGA---AAACGGCGCTTTTAATTTCCAAA 123801
|||| |||| ||||| |||| | |||| | || | | | | ||||| |
Sbjct 17646 CCTGGCCTCGA-TTGCGTTGAACATGTTCGTCCAGTCCGACCGTACGTATGATTTCGCGA 17704
Query 123802 CGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCGATGTTA 123858
||| ||| || | |||| | || | | || |||||||| |||||||| || |
Sbjct 17705 AGCTGAAAGAGGTAGCCAAAA---TCGTGACGCGCAACTTGAACAAGATTATCGACGTGA 17761
Query 123859 ATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGG 123918
| || || || || ||||||| || || || ||| | ||| |||| | |
Sbjct 17762 ACTTCTACCCGGTGCCGGAAGCGAAGCGCTCGAACATGCGCCACCGTCCGATCGGTATCG 17821
Query 123919 GCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAG 123978
|| | || || |||| || ||||| | || || || | |||||||| || | || |
Sbjct 17822 GCGTCCAGGGTATGGCTGATGCGTTCATCTTGATGGGCTTCCCGTACGAGAGTGCGGAGG 17881
Query 123979 CAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCT 124038
| || ||| ||| ||| ||| || || || || ||||| || |||| || ||||
Sbjct 17882 CGCAGAAGCTCAATCAGCAGATATTTGAGACCATCTACTACGGTGCGCTGGAAGCTAGCT 17941
Query 124039 GCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAG 124098
|||| | || | || ||||||| | |||| ||| |||| |||| |
Sbjct 17942 GCGAGATGGCCGCCCAGGAGGGACCGTACGAGACGTACGAGGGGTCTCCGGTGAGCAAGG 18001
Query 124099 GTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCG-TT 124157
| ||| ||||||||||||||||||| |||||| | ||||| | ||| |||
Sbjct 18002 GCATTCTGCAGTACGACATGTGGAACAAGGTACCGACGGACCTGTGGAATTGG-GCGACG 18060
Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217
| || || || | | |||||| |||| ||||| ||| || | ||| ||||||
Sbjct 18061 CTGAAGGAAAAGATTGCCAAACACGGTGTGCGCAACTCACTGCTGCTCGCGCCGATGCCG 18120
Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277
||||| | || || |||||||| || |||||||| || |||||||||| || |||
Sbjct 18121 ACGGCTTCGACGGCACAAATTTTGGGCAACAACGAGTCGTTCGAGCCGTATACGTCCAAC 18180
Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCA 124327
| ||| || || || | | ||||| ||||| ||| | || || ||
Sbjct 18181 GTTTACAACCGGCGCGTTCTGTCGGGCGAGTTTCAGGTGGTGAACCACCA 18230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451809036375400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |