Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2173 266 3e-66 >seq2173 Length=41539 Score = 266 bits (294), Expect = 3e-66 Identities = 927/1430 (65%), Gaps = 30/1430 (2%) Strand=Plus/Plus Query 122916 CAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGG-ACGCGACATCGAAAACGCGAC 122974 || |||||||| ||||||||||| || ||| | || || ||| |||||||| |||| Sbjct 16813 CAGCATATGCTGATGCGCGTCGCCATCGGCATCCATGGCACG-GACATCGAGGCTGCGAT 16871 Query 122975 CGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGTCCCACTTTGTTCGC 123034 ||| || || || || | || | | || || || || || || ||||||| Sbjct 16872 CGAGACGTATAATCTGCTCTCGGAGCGTTACTTTACCCATGCCTCGCCGACCATGTTCGC 16931 Query 123035 CGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAG 123094 || | ||| || || ||| |||| || || ||| |||| ||| || ||| ||||| Sbjct 16932 GGCGGCTACGCAGCGTCCCCAGCTGTCGTCTTGCTTTCTGCTGACCATGTCCGACGACAG 16991 Query 123095 CATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGG 123154 |||| || ||||| || || || | ||||| |||| ||||| | || ||| || Sbjct 16992 CATCGAAGGCATCTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCTGCCGGTGG 17051 Query 123155 CATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGG 123214 ||| || ||||||||||| | | | | |||| |||| |||| |||| Sbjct 17052 CATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTACATCTCCGGCACGAACGG 17111 Query 123215 AATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGA 123274 ||| | |||| | | | |||||||| || ||||| ||| | | ||| ||||||| Sbjct 17112 AATTTCGAACGGGTTGGTGCCGATGCTGCGCGTGTACAACAACACGGCACGGTACGTCGA 17171 Query 123275 CCAGGGCGGC---AAACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGA 123331 ||||||||| || || || ||| | || ||||| || || |||||||||| || Sbjct 17172 TCAGGGCGGCAATAAGCGGCCGGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGA 17231 Query 123332 TGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGGAAGAAAAGAAAGCCCGCGA 123391 ||||| || ||||| || | || |||| || ||| || | || || || Sbjct 17232 TGTGTTTGAGTTTTTGGATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCACGGGA 17291 Query 123392 TTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGACGCGTAAAAGACGACGGCGT 123451 |||| ||||| | ||| | || ||| |||| |||| ||||| | | ||| Sbjct 17292 CATGTTCTACGCGCTCTGGATTCCGGATCTGTTCATGCAGCGCGTGGAGGCGAACGAAAC 17351 Query 123452 GTGGTCGCTCATGTGTCCCGATCG-GTGTCCCGGCTTGAGCGACGTTTACGGCAATCAGT 123510 |||| | ||||| |||| || |||||||| ||| ||| | ||| | ||| Sbjct 17352 GTGGAGTTTGATGTG-CCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGT 17410 Query 123511 TTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGTTCCGGCAC 123570 | || |||||||| || || ||| || ||| | | ||||| ||| | Sbjct 17411 TCGAGAAGTTGTACACGGGCTATGAGAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGC 17470 Query 123571 GTGATTTGTTCAAATTT---ATTATCGAAACACAAGTCGAAACCGGAACGCCGTACATGC 123627 ||| ||| ||| || |||||| | || || || || || |||||||||| Sbjct 17471 AGGATCTGT---GGTTTGCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGC 17527 Query 123628 TCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAAAATGTA 123687 | ||||| ||||| ||||| | |||| ||| ||| ||| | || || || || || Sbjct 17528 TGTACAAGGACGCGTGCAATCGCAAAAGCAACCAGCAAAACATCGGCACCATCAAGTGCT 17587 Query 123688 GTAATCTTTGCTCCGAAATTATCGAATA--CAGCGATGCCGATCAAGTGGCCGTGTGTAA 123745 ||| |||||| |||| ||| | || || | ||| | || ||||||| ||||| || Sbjct 17588 CTAACCTTTGCACCGAGATTGTGGAGTACTCGTCGAAG--GACGAAGTGGCGGTGTGCAA 17645 Query 123746 TTTGGCTTCGATTTGCG-TGAATCGTTGCGTCGA---AAACGGCGCTTTTAATTTCCAAA 123801 |||| |||| ||||| |||| | |||| | || | | | | ||||| | Sbjct 17646 CCTGGCCTCGA-TTGCGTTGAACATGTTCGTCCAGTCCGACCGTACGTATGATTTCGCGA 17704 Query 123802 CGCTCAAACGCATAACAAAAACTGTAGTAAAG---AATTTGAACAAAATTATCGATGTTA 123858 ||| ||| || | |||| | || | | || |||||||| |||||||| || | Sbjct 17705 AGCTGAAAGAGGTAGCCAAAA---TCGTGACGCGCAACTTGAACAAGATTATCGACGTGA 17761 Query 123859 ATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACACAGACCGGTCGGAGTGG 123918 | || || || || ||||||| || || || ||| | ||| |||| | | Sbjct 17762 ACTTCTACCCGGTGCCGGAAGCGAAGCGCTCGAACATGCGCCACCGTCCGATCGGTATCG 17821 Query 123919 GCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCCGTACGAAAGCGACGAAG 123978 || | || || |||| || ||||| | || || || | |||||||| || | || | Sbjct 17822 GCGTCCAGGGTATGGCTGATGCGTTCATCTTGATGGGCTTCCCGTACGAGAGTGCGGAGG 17881 Query 123979 CAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTACGGCGCTTTGGAGGCGAGCT 124038 | || ||| ||| ||| ||| || || || || ||||| || |||| || |||| Sbjct 17882 CGCAGAAGCTCAATCAGCAGATATTTGAGACCATCTACTACGGTGCGCTGGAAGCTAGCT 17941 Query 124039 GCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCGGGCAGCCCGGCGAGCCGAG 124098 |||| | || | || ||||||| | |||| ||| |||| |||| | Sbjct 17942 GCGAGATGGCCGCCCAGGAGGGACCGTACGAGACGTACGAGGGGTCTCCGGTGAGCAAGG 18001 Query 124099 GTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAATTTGTGGGACTGGAGCG-TT 124157 | ||| ||||||||||||||||||| |||||| | ||||| | ||| ||| Sbjct 18002 GCATTCTGCAGTACGACATGTGGAACAAGGTACCGACGGACCTGTGGAATTGG-GCGACG 18060 Query 124158 TTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTGTTGGTGGCGTACATGCCG 124217 | || || || | | |||||| |||| ||||| ||| || | ||| |||||| Sbjct 18061 CTGAAGGAAAAGATTGCCAAACACGGTGTGCGCAACTCACTGCTGCTCGCGCCGATGCCG 18120 Query 124218 ACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTCGAGCCGTTCACTAACAAT 124277 ||||| | || || |||||||| || |||||||| || |||||||||| || ||| Sbjct 18121 ACGGCTTCGACGGCACAAATTTTGGGCAACAACGAGTCGTTCGAGCCGTATACGTCCAAC 18180 Query 124278 TTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATAAATCATCA 124327 | ||| || || || | | ||||| ||||| ||| | || || || Sbjct 18181 GTTTACAACCGGCGCGTTCTGTCGGGCGAGTTTCAGGTGGTGAACCACCA 18230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451809036375400