Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2173 241 2e-58 >seq2173 Length=41539 Score = 241 bits (266), Expect = 2e-58 Identities = 356/502 (71%), Gaps = 2/502 (0%) Strand=Plus/Minus Query 203833 CTTCGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTA 203892 |||||| ||||| ||||||||||| || || || ||||| ||| | | | || |||||| Sbjct 18579 CTTCGTTTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTA 18520 Query 203893 CATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCAC 203952 |||||| ||||| |||||| ||| |||| ||| | |||||| || | ||| |||| Sbjct 18519 CATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTA 18460 Query 203953 GTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012 ||| || || |||| ||| ||||| | ||||| ||||||||||| | |||| || Sbjct 18459 GTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTC 18400 Query 204013 TGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCT 204072 || ||||| | ||| || ||| |||||||||||| ||||| ||| ||| || | Sbjct 18399 GGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCG 18340 Query 204073 GGTGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 | | || | | | | | || || |||||||||||||| ||||| | | | Sbjct 18339 CACTTCCTTCGGTATTTGCT-CGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGT 18281 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | || || |||||| || | || |||| ||| | ||||||| |||| | Sbjct 18280 TCTTCATATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCA 18221 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 | |||||| || || ||||| || | ||| || | | |||| || | || |||| Sbjct 18220 CCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGA 18161 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 ||| |||||||||||| ||||| || || || ||||| ||||| || || || |||| Sbjct 18160 ACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCA 18101 Query 204312 GGGAGTTGCGCACACCGTATTT 204333 | |||||||||||||||| ||| Sbjct 18100 GTGAGTTGCGCACACCGTGTTT 18079 Score = 100 bits (110), Expect = 5e-16 Identities = 192/283 (68%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 205265 TCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGG 205324 ||| ||||||||||||| | | | ||| | || || |||| ||| || || ||||| Sbjct 17231 TCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGA 17172 Query 205325 TCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTC 205384 || || || | | | |||| | || |||||||||||||||| ||||| | | Sbjct 17171 TCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATT 17112 Query 205385 CCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATC 205444 |||||||||| | |||| || || | |||| | | | | | | || || Sbjct 17111 CCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATG 17052 Query 205445 CCGCCAGAACACTTGGCGATCTGGGCGCACTCTTGCAGAGTGCTGTAGATGCCTGCGATG 205504 || || | | |||||| |||| | ||||||| | ||| ||| |||||||||| ||||| Sbjct 17051 CCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATG 16992 Query 205505 GAATCGTCCGCCAGTGTCACCAGATAGCACGAAGCCAGCTTGG 205547 ||||| | || |||| |||| |||| || | ||||| || Sbjct 16991 CTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGG 16949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794813631144400