Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq21450 127 3e-24 seq2133 127 3e-24 >seq21450 Length=466521 Score = 127 bits (140), Expect = 3e-24 Identities = 196/278 (71%), Gaps = 4/278 (1%) Strand=Plus/Minus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 ||||||||||||| || || ||||||||||| || || | | |||| || ||| || Sbjct 4539 CAGATCCTCGTCGGAGAACCCGGTACCGATCTTGCAGATCGTCTGGTACTCCTCGTTCTC 4480 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCA--CCCCG 197139 | || ||| |||||||| | |||| ||||||| || || || | ||| ||| ||||| Sbjct 4479 GTCATCGTAGCAGGCGAGCAGGAAACCGCCGTACGTGCCGGTACGCTTGCCCCGTCCCCG 4420 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || |||||||| |||||||| || | ||| | ||||| || ||| |||||| Sbjct 4419 GT--ACCCACCGATAACGACCAGATCGAGCGAGTCACCGACCCCGGACAGGTAGTCTTTC 4362 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 ||||| || | ||| | | || | || || ||||| || || || | | | || Sbjct 4361 TTCAGCTTCAACCAATTGCGTGACCGTTTCGCGATCTCATACGTAGCCTCGCGGACGAGC 4302 Query 197260 GTCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGC 197297 || || | ||||| |||||||| | ||||||| || Sbjct 4301 GTTTTCACCATCAGGCCCTCGCAGTTGCCCTTCACCGC 4264 >seq2133 Length=70243 Score = 127 bits (140), Expect = 3e-24 Identities = 196/278 (71%), Gaps = 4/278 (1%) Strand=Plus/Plus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTC 197081 ||||||||||||| || || ||||||||||| || || | | |||| || ||| || Sbjct 46756 CAGATCCTCGTCGGAGAACCCGGTACCGATCTTGCAGATCGTCTGGTACTCCTCGTTCTC 46815 Query 197082 GGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCC--ACCCCG 197139 | || ||| |||||||| | |||| ||||||| || || || | ||| ||| ||||| Sbjct 46816 GTCATCGTAGCAGGCGAGCAGGAAACCGCCGTACGTGCCGGTACGCTTGCCCCGTCCCCG 46875 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | | || |||||||| |||||||| || | ||| | ||||| || ||| |||||| Sbjct 46876 --GTACCCACCGATAACGACCAGATCGAGCGAGTCACCGACCCCGGACAGGTAGTCTTTC 46933 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 ||||| || | ||| | | || | || || ||||| || || || | | | || Sbjct 46934 TTCAGCTTCAACCAATTGCGTGACCGTTTCGCGATCTCATACGTAGCCTCGCGGACGAGC 46993 Query 197260 GTCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGC 197297 || || | ||||| |||||||| | ||||||| || Sbjct 46994 GTTTTCACCATCAGGCCCTCGCAGTTGCCCTTCACCGC 47031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676438902341200