Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 363 3e-95
seq2702 113 8e-20
>seq2173
Length=41539
Score = 363 bits (402), Expect = 3e-95
Identities = 893/1330 (67%), Gaps = 62/1330 (5%)
Strand=Plus/Minus
Query 212894 CTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAA 212953
||||| |||||| |||| || | ||| || || || || || || | || | |||||
Sbjct 18240 CTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAAC 18181
Query 212954 GTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGT 213013
||| || || || ||||||| ||||||||| |||| ||| ||||| || || ||
Sbjct 18180 GTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGT 18121
Query 213014 GGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAG 213073
||||| || || | ||| || ||| | ||| ||||| | | | || | ||
Sbjct 18120 CGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAG 18061
Query 213074 CTCTGCCCAGTCCCATCTGCCAGACAGGTCC-TCGT--CCTTCACGTTCCACATGTCAAA 213130
| ||||| | ||| ||||||| ||| |||| |||||||||||| |
Sbjct 18060 CGTCGCCCAATTCCA---------CAGGTCCGTCGGTACCTT---GTTCCACATGTCGTA 18013
Query 213131 CTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTT 213190
||||| ||||| |||||||| || |||| ||| | ||| || || | ||
Sbjct 18012 CTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGC 17953
Query 213191 GGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTT 213250
||||| ||||||| || | ||| ||| ||||||||||||| |||||||||| | ||
Sbjct 17952 GGCCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATT 17893
Query 213251 GAGCTTCTTGGCCTCTGG------GGACGTGAAGGGCATCATCATGCGTTGGAACACATC 213304
|||||||| ||||| | | ||| |||| ||||| ||| ||| ||||
Sbjct 17892 GAGCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATG------AACGCATC 17839
Query 213305 AGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA---CTTGGAGCA 213361
||||| |||||||| ||||| ||||| || | ||| | || ||| || ||| |
Sbjct 17838 AGCCATACCCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCT-- 17781
Query 213362 CTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTT 213421
||| || ||||| ||||| |||||| |||||||| | |||||| || | | |||
Sbjct 17780 -TCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTT 17722
Query 213422 GGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGG 213481
|| || | ||| | | || || | ||||| | || ||| || |||
Sbjct 17721 GGCTACCTCTTTCAGCTTCGCGAAATC--ATACGTA-CGGTCGGACTGGACGAACATGTT 17665
Query 213482 CAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTC---CTGAGAGTCTGTGTACTCCAT 213538
|| || || |||||||||||| || ||||| || || || | ||||||||
Sbjct 17664 CAACGCAATCGAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGAC---GAGTACTCCAC 17608
Query 213539 GATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGC 213598
||||||||||| ||||| ||| ||||||||| | ||| || ||||| | |||||
Sbjct 17607 AATCTCGGTGCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTT-GCTTTTGC 17549
Query 213599 GTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTA 213657
| | ||| | |||||||| |||||||| || || ||||| | |||||| | | |
Sbjct 17548 GATTGCACGCGTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGA 17489
Query 213658 TCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCG 213716
|| ||| || | |||| ||||| ||| || ||| ||| | | | |||
Sbjct 17488 TCGCAAACCACAGAT-CCTGCGCCTTTACCTGGCGGATGA-AGCGGCCCTCCTT--CTCA 17433
Query 213717 TA--CTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA-GACCCTGTCCAGTCCCGGACAG 213773
|| | || ||| | || | ||| || | |||||| || | | ||| ||| ||||||
Sbjct 17432 TAGCCCGT--GTACAACTTCTCGAACTCTTCGCCCCACGAATCGG-CCAATCCGGGACAG 17376
Query 213774 GA-TGCGGGACACATGAGGCTCCA-GTCCCCGTCATCTCTGACTCTCTGCATGAACAGGT 213831
|||||| ||||| | ||||| || | || ||| || | |||||||||||| |
Sbjct 17375 TCGTGCGGG-CACATCAAACTCCACGTTTCGTTCGCCTCC-ACGCGCTGCATGAACAGAT 17318
Query 213832 CCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTT 213891
|||| | ||| |||||| ||||| ||||| | | | ||| ||| || | |||||
Sbjct 17317 CCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTT 17258
Query 213892 TGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGG 213951
| |||||| | ||| ||||| | || ||||||||||||||| |||||||||||| |
Sbjct 17257 TCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACG 17198
Query 213952 CGCCCGGCC---TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008
| ||||||| | ||||||||||| || || || ||| ||||| | | |||||
Sbjct 17197 CACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCA 17138
Query 214009 GGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC 214068
| | || |||| |||||| || |||||| || || | || |||| || ||||
Sbjct 17137 GCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCC 17078
Query 214069 TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128
| | | || | ||||| ||||||||||| |||||||||||| ||||| ||
Sbjct 17077 GGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCT 17018
Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCG 214188
||| || || |||||| | |||||||| || | | | |||||| ||||| ||
Sbjct 17017 TCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACG 16958
Query 214189 AGAGCTGGGG 214198
| ||||||||
Sbjct 16957 ACAGCTGGGG 16948
>seq2702
Length=120640
Score = 113 bits (124), Expect = 8e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548
||| ||| ||||||| || ||||||||| || |||||| || || || ||||| |||||
Sbjct 114059 CTTCAGCTCCTTCACCTTGTCCTCCAGCTTCGAGATGCGCTCGAGCTTCCGCCGTCGGCA 114118
Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608
|||| ||| |||| |||||||| || | ||| || || ||||||||| |||||
Sbjct 114119 CTTGGAGGCGGCCACCCGGTTCCGCAGCCGCTTCCGCTCGAGCTTGATGCGCTCCTGCGA 114178
Query 241609 CTCCATGTCGATCGG 241623
|||||||||||||||
Sbjct 114179 CTCCATGTCGATCGG 114193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931132648441600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |