Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2173 279 1e-69 >seq2173 Length=41539 Score = 279 bits (308), Expect = 1e-69 Identities = 715/1070 (67%), Gaps = 34/1070 (3%) Strand=Plus/Minus Query 221356 CACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTG 221415 ||||||| ||| ||||||| |||||| || || | | | ||||| |||| | | Sbjct 17994 CACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCA-GCTAG 17936 Query 221416 CGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGG 221474 | || || ||| ||| ||||||||||||||| ||| || ||||| ||| ||||| | Sbjct 17935 CTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCG 17876 Query 221475 GAGAAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 | | | || | | || || |||| | | || |||| ||||| || |||||| Sbjct 17875 CACTCTCGTACGGGAAGCCCATCAAGATGAACG-CATCAGCCATACCCTGGACGCCGATA 17817 Query 221534 CCGATGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGAC 221592 ||||| || | ||| | | |||| || ||| |||||| ||||| || || ||||| || Sbjct 17816 CCGATCGGACGGTGGCGCATGTTCGA-GCGCTTCGCTTCCGGCACCGGGTAGAAGTTCAC 17758 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 |||||| | ||||| | ||| | || | || ||| | ||||| |||||||| | Sbjct 17757 GTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAA 17698 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 || | || || |||| || || || || ||| | |||| Sbjct 17697 ATC--ATACGTACG-------GTCG--GACTGG----ACGAACATGTTCAACGCAATCGA 17653 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||||||||| ||||| ||||| |||||||| | |||| | ||||| || || || Sbjct 17652 GGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCAAAG 17593 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832 ||| |||||||||||| || | || | || || ||||||||| |||||||| Sbjct 17592 GTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTT 17533 Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892 ||| ||||| | || |||| ||||||| ||| | | | ||| ||| || || Sbjct 17532 GTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATC 17473 Query 221893 TCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 ||| || | ||| | ||| ||||| ||| ||||| || || || | | Sbjct 17472 -CTGCGCCTTTACCTGGCGGATGAAGCGGCCCTC---CTTCTCATAGCCCGTGTACAACT 17417 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTG-GCGGGACACATCAGA 222010 | || |||| ||| || ||| ||| ||| || ||||| | ||||| ||||||| | Sbjct 17416 TCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGG-CACATCAAA 17358 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 ||||| | ||| | | || | ||||||||| || ||||| ||||| ||||| | Sbjct 17357 CTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAG 17298 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 || | || | | ||| ||||||| |||| |||||||| ||||||||||||||||| Sbjct 17297 AACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCA 17238 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | || |||||||||||||||| |||| ||| | || || || ||||| ||||| Sbjct 17237 AACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCG 17178 Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 |||||||| || || || |||| | | ||| || |||| |||| ||||| Sbjct 17177 CCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTC 17118 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCA--GAC 222307 || ||||| ||||| ||||||| || |||| || | | | ||| | Sbjct 17117 GAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCC---GGATGCAGTGCACGTTC 17061 Query 222308 ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 | ||||| |||||||| || ||||||| ||||| ||| || ||||| |||| Sbjct 17060 AGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATG 17001 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG 222417 || || || ||| || | | |||||||||| |||||||||| ||| Sbjct 17000 CCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTG 16951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928445803105600