Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq26551 127 3e-24
>seq26551
Length=145895
Score = 127 bits (140), Expect = 3e-24
Identities = 360/551 (65%), Gaps = 4/551 (1%)
Strand=Plus/Plus
Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816
||| ||||||| ||| || || | | || || || || |||||||| || || |
Sbjct 16899 CTCGACAAACTCACGCACCGAGTGCGTTTCGCCCGTCGCGATGACAAAATCTTCCGGCTG 16958
Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876
|| || || | ||| |||||||| ||||| || || ||| |||| || |||||||| ||
Sbjct 16959 CTCCTGCTGCATCATCAACCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCG 17018
Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT-- 47934
| ||| ||||| || || | | || || |||| ||| || || |||
Sbjct 17019 CTTCGAATCGAGATTACCCAGCTCGACGCACTCCTGCTGACCGAGCGAAAT--CTTCGCC 17076
Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994
| | | || ||||| || || |||||| | ||||| || | || || || || ||
Sbjct 17077 ACCGAGCGGGTGATCTTGCGCGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTG 17136
Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054
|| || || || | ||||| |||| ||| | || |||||||| | |||||||||
Sbjct 17137 AACAGGATCCCGTTGCAGGCGAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAG 17196
Query 48055 TACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTC 48114
|| || || | |||||| | || || || || |||||||| ||||| | || ||
Sbjct 17197 TAGCCGTACATCTTTGCACATGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTC 17256
Query 48115 TGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174
|| || ||||| |||||| || || || || ||||| || || |||| || |||
Sbjct 17257 TGCGGCGTCTCCACCACCTTCCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACC 17316
Query 48175 CTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCT 48234
| | ||| | | |||| || || |||| | ||| || || | |||||
Sbjct 17317 GTTTTCTCCTGGCCGACGGTGCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCC 17376
Query 48235 GTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGA 48294
|| | ||||| ||| || || ||||| | ||| || || || || || | |||
Sbjct 17377 ACCTCCGCCGTATATTCGCTCAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCAGA 17436
Query 48295 TTATAAATCTC 48305
|| || || ||
Sbjct 17437 TTGTAGATTTC 17447
Score = 125 bits (138), Expect = 1e-23
Identities = 281/420 (67%), Gaps = 4/420 (1%)
Strand=Plus/Plus
Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816
||| ||||||| ||| || || | | || || || || |||||||| || || |
Sbjct 15533 CTCGACAAACTCACGCACCGAGTGCGTTTCGCCCGTCGCGATGACAAAATCTTCCGGCTG 15592
Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876
|| || || | ||| |||||||| ||||| || || ||| |||| || |||||||| ||
Sbjct 15593 CTCCTGCTGCATCATCAACCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCG 15652
Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT-- 47934
| ||| ||||| || || | | || || |||| ||| || || |||
Sbjct 15653 CTTCGAATCGAGATTACCCAGCTCGACGCACTCCTGCTGACCGAGCGAAAT--CTTCGCC 15710
Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994
| | | || ||||| || || |||||| | ||||| || | || || || || ||
Sbjct 15711 ACCGAGCGGGTGATCTTGCGCGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTG 15770
Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054
|| || || || | ||||| |||| ||| | || |||||||| | |||||||||
Sbjct 15771 AACAGGATCCCGTTGCAGGCGAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAG 15830
Query 48055 TACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTC 48114
|| || || | |||||| | || || || || |||||||| ||||| | || ||
Sbjct 15831 TAGCCGTACATCTTTGCACATGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTC 15890
Query 48115 TGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174
|| || ||||| |||||| || || || || ||||| || || |||| || |||
Sbjct 15891 TGCGGCGTCTCCACCACCTTCCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACC 15950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665208528561800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |