Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq26551 127 3e-24 >seq26551 Length=145895 Score = 127 bits (140), Expect = 3e-24 Identities = 360/551 (65%), Gaps = 4/551 (1%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||| ||||||| ||| || || | | || || || || |||||||| || || | Sbjct 16899 CTCGACAAACTCACGCACCGAGTGCGTTTCGCCCGTCGCGATGACAAAATCTTCCGGCTG 16958 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || || || | ||| |||||||| ||||| || || ||| |||| || |||||||| || Sbjct 16959 CTCCTGCTGCATCATCAACCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCG 17018 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT-- 47934 | ||| ||||| || || | | || || |||| ||| || || ||| Sbjct 17019 CTTCGAATCGAGATTACCCAGCTCGACGCACTCCTGCTGACCGAGCGAAAT--CTTCGCC 17076 Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994 | | | || ||||| || || |||||| | ||||| || | || || || || || Sbjct 17077 ACCGAGCGGGTGATCTTGCGCGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTG 17136 Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054 || || || || | ||||| |||| ||| | || |||||||| | ||||||||| Sbjct 17137 AACAGGATCCCGTTGCAGGCGAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAG 17196 Query 48055 TACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTC 48114 || || || | |||||| | || || || || |||||||| ||||| | || || Sbjct 17197 TAGCCGTACATCTTTGCACATGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTC 17256 Query 48115 TGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174 || || ||||| |||||| || || || || ||||| || || |||| || ||| Sbjct 17257 TGCGGCGTCTCCACCACCTTCCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACC 17316 Query 48175 CTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGCCTATGGCATCT 48234 | | ||| | | |||| || || |||| | ||| || || | ||||| Sbjct 17317 GTTTTCTCCTGGCCGACGGTGCGGATGGCATCGAGCAGCCGCAGCGTACCGACCGCATCC 17376 Query 48235 GTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTCTGTGCCCCAAGA 48294 || | ||||| ||| || || ||||| | ||| || || || || || | ||| Sbjct 17377 ACCTCCGCCGTATATTCGCTCAGGTCGAACGAGATCTTGACGTGGCTTTGCGCGGCCAGA 17436 Query 48295 TTATAAATCTC 48305 || || || || Sbjct 17437 TTGTAGATTTC 17447 Score = 125 bits (138), Expect = 1e-23 Identities = 281/420 (67%), Gaps = 4/420 (1%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||| ||||||| ||| || || | | || || || || |||||||| || || | Sbjct 15533 CTCGACAAACTCACGCACCGAGTGCGTTTCGCCCGTCGCGATGACAAAATCTTCCGGCTG 15592 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || || || | ||| |||||||| ||||| || || ||| |||| || |||||||| || Sbjct 15593 CTCCTGCTGCATCATCAACCACATCGCCTCAACGTAGTCTTTGGCGTGGCCCCAGTCGCG 15652 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTT-- 47934 | ||| ||||| || || | | || || |||| ||| || || ||| Sbjct 15653 CTTCGAATCGAGATTACCCAGCTCGACGCACTCCTGCTGACCGAGCGAAAT--CTTCGCC 15710 Query 47935 AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTA 47994 | | | || ||||| || || |||||| | ||||| || | || || || || || Sbjct 15711 ACCGAGCGGGTGATCTTGCGCGTCACAAAATTCTCACCCCGCCGGGGTGACTCGTGGTTG 15770 Query 47995 AAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAG 48054 || || || || | ||||| |||| ||| | || |||||||| | ||||||||| Sbjct 15771 AACAGGATCCCGTTGCAGGCGAACATATTGTACGCCTCGCGATAGTTGATCACTATCCAG 15830 Query 48055 TACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTC 48114 || || || | |||||| | || || || || |||||||| ||||| | || || Sbjct 15831 TAGCCGTACATCTTTGCACATGCGTACGGCGAGCGCGGATAGAATGGTGTCTTTTCGTTC 15890 Query 48115 TGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174 || || ||||| |||||| || || || || ||||| || || |||| || ||| Sbjct 15891 TGCGGCGTCTCCACCACCTTCCCGTACAGCTCGGACGTGGACGCCTGGTAGAAGCGGACC 15950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665208528561800