Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq12511 286 5e-72 seq31375 262 5e-65 seq12585 127 3e-24 seq23407 125 9e-24 >seq12511 Length=351280 Score = 286 bits (316), Expect = 5e-72 Identities = 755/1147 (66%), Gaps = 8/1147 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || |||||||| ||||| |||| | || Sbjct 289575 ACCGTGCCAGCGTACTTCAACGACTCGCAGCGTCAGGCGACGAAGGATGCTGGAACCATC 289634 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 | || || ||| || | || ||||| || || || ||||| || || || || ||| Sbjct 289635 TCCGGGCTGAACGTCCTGCGTATCATCAACGAGCCGACCGCGGCCGCCATCGCGTACGGT 289694 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||||||||||| | || || || || || ||||||| ||||| || || ||||| Sbjct 289695 CTGGACAAGAAGACGGCCGGCGAACGCAACGTGCTGATCTTCGATCTGGGCGGCGGTACC 289754 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || || || || | || || || | || || ||||| || ||| | || || || Sbjct 289755 TTCGACGTGTCGATCCTGTCGATCGATGACGGCATCTTCGAGGTGAAGTCGACCGCCGGA 289814 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAG 196018 || || ||||| || ||||| || ||||| ||||| | || || || | || Sbjct 289815 GACACCCATCTGGGCGGTGAGGACTTCGACAACCGTCTGGTGAACCACTTCGCTCAGGAA 289874 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| || || | ||||| ||| | ||| || | || || ||||| || | Sbjct 289875 TTCAAGCGCAAACACAAGAAGGATCTGTCTACGAACAAGCGTGCGCTGCGTCGTCTGCGC 289934 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 || || ||||| || || || || || || || || || | || | | | || || Sbjct 289935 ACGGCTTGTGAGCGCGCGAAGCGCACGCTGTCCTCGTCGACGCAGGCCAGCATCGAAATC 289994 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 |||||| |||| || |||| || ||||| || | || || ||||| ||||| || ||| Sbjct 289995 GATTCGCTGTTCGAGGGAACCGATTTCTACACCTCGATCACGCGTGCTCGTTTCGAGGAG 290054 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCA 196258 | ||| | ||| |||| | | ||||| || || || | | || |||||||| Sbjct 290055 CTGAACGCCGATCTGTTCCGCTCGACGATGGAGCCGGTGGAGAAGGCGCTGCGTGACGCC 290114 Query 196259 AAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCG 196318 |||||||| ||| | | || | || || || || || || ||||| |||||||| ||| Sbjct 290115 AAGATGGACAAGGCCAGCATTCACGACATCGTGCTGGTCGGCGGATCGACCCGTATCCCG 290174 Query 196319 AAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAAC 196378 ||| | || | |||| ||||||||| || || || ||||| |||||||| Sbjct 290175 AAGGTGCAGAAACTGCTGCAGGACTTCTTCAACGGCAAGGAGTTGAACAAGTCGATCAAC 290234 Query 196379 CCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC 196438 || ||||| || || || || ||||| || || ||||| || || || || | |||| Sbjct 290235 CCAGATGAGGCCGTCGCGTACGGTGCCGCTGTGCAGGCCGCCATCCT-GCA--CGGTGAC 290291 Query 196439 AA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTT 196495 || | | || || ||||| ||||| || || || | || | || || ||| | Sbjct 290292 AAGTCGGAGGAGGTGCAGGATCTGCTGCTGCTCGACGTGACGCCGCTGTCGCTCGGTATC 290351 Query 196496 GAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAG 196555 || || || ||||| || ||| | |||| | | ||||| || || ||||| ||| Sbjct 290352 GAGACGGCCGGTGGAGTCATGTCCGTGCTTATCAAGCGTAACACGACCATCCCGACGAAG 290411 Query 196556 AAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATAT 196615 || || || | || || || || || || || ||||| | || || || | Sbjct 290412 CAGACGCAGACGTTCACCACCTACTCGGACAACCAGCCCGGTGTGCTGATCCAGGTGTTC 290471 Query 196616 GAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGG 196674 || || || || | || || | ||||| ||| |||| || || | ||||| ||| || Sbjct 290472 GAGGGCGAGCG-TGCCATGACGAAGGACAACAATCTGCTGGGCAAGTTCGAGCTGAGCGG 290530 Query 196675 GATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAA 196734 || ||| | || || | || || ||||||||| | || |||||||| || || || Sbjct 290531 CATCCCACCGGCCCCGCGTGGCGTCCCACAGATTGAGGTCACTTTCGATATCGATGCGAA 290590 Query 196735 TGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGAT 196794 || || || ||||| || ||| || ||| | | ||| | |||||| || Sbjct 290591 CGGCATCCTGAACGTGACGGCTCTAGAGAAGTCGACGAACAAGGAAAACAAGATTACCAT 290650 Query 196795 TACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGA 196854 || || |||||||| || || |||||||| || || || ||||| | || || || Sbjct 290651 CACGAACGACAAGGGCCGTCTGAGCAAGGAGGACATCGAGCGCATGGTGAACGAGGCCGA 290710 Query 196855 AAAGTAC 196861 |||||| Sbjct 290711 GAAGTAC 290717 >seq31375 Length=320984 Score = 262 bits (290), Expect = 5e-65 Identities = 751/1147 (65%), Gaps = 12/1147 (1%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| ||||| || || ||||| || ||||| || | ||| || Sbjct 147216 ACGGTGCCGGCCTACTTCAACGATTCGCAGCGTCAGGCAACGAAGGATGCCGGTGCGATC 147275 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || ||||| ||||| || ||||| || ||||| || ||| Sbjct 147276 GCCGGGCTGAACGTGCTGCGCATCATCAACGAACCGACGGCGGCGGCCATTGCGTACGGT 147335 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||||||||||| || || ||| || || ||||||| ||||| || ||||| || Sbjct 147336 CTGGACAAGAAGGTGGGCGGAGAGCGTAACGTGCTGATCTTCGATCTGGGCGGTGGCACC 147395 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || || || || | || | || || | || || ||||| || ||| | || || ||| Sbjct 147396 TTCGACGTGTCGATCCTGACGATCGAGGACGGCATCTTCGAGGTGAAGTCGACCGCCGGT 147455 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTGATGAG 196018 || || ||||| || || ||||| ||||| || | | || || || ||| Sbjct 147456 GACACGCATCTGGGCGGCGAAGACTTCGACAACCGCATGGTGTCGCACTTCGTGGAGGAG 147515 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| || ||| | ||||| || || | | || |||| || || ||||| | Sbjct 147516 TTCAAGCGCAAGCACAAGAAGGACATCACGAGCAACAAGCGGGCCCTGCGCCGGCTGCGT 147575 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 || || || || || || || || || || || | || | || | | ||||||| Sbjct 147576 ACGGCTTGCGAGCGGGCGAAGCGTACGCTTTCCGCGTCGACCCAGGCCAGCATTGAGATC 147635 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 |||||| ||| || || || || ||||| || | || || | || ||||| || ||| Sbjct 147636 GATTCGCTGTACGAGGGTATCGATTTCTACACCTCGATCACGAGGGCCCGTTTCGAGGAG 147695 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACC--TGTTGAACAAGTACTTCGTGACG 196256 | ||||| || |||| | | |||||||| ||| ||| | || || || | Sbjct 147696 CTGAACTCGGACCTGTTCCGCGACACGATGGAACCGGTGTCGAAG--GCTCTGCGCGATG 147753 Query 196257 CAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTC 196316 | |||||||||||| | | | | || || || || || || ||||| ||||| || | Sbjct 147754 CGAAGATGGATAAGGCCAGCATCCACGACATCGTGCTAGTCGGTGGATCGACCCGCATCC 147813 Query 196317 CGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCA 196376 ||||| | || || |||| ||||||||| || || | ||||| |||||| Sbjct 147814 CGAAGGTGCAGAAGCTGCTGCAGGACTTCTTCAACGGCAAGGAGCTGAACAAGTCGATCA 147873 Query 196377 ACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTG 196436 | |||||||| || || || || ||||| || |||||||| || ||||| ||| | || Sbjct 147874 ATCCGGATGAGGCCGTCGCGTACGGTGCCGCGGTTCAGGCCGCCATTCT-GCAG--GGTG 147930 Query 196437 ACA---ATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTC 196493 ||| | || || ||||| ||||| || || ||| | || | || || || Sbjct 147931 ACACGTCGGAGGCGGTGCAGGATCTGCTGCTGCTGGACGTTACGCCGCTGTCGCTCGGCA 147990 Query 196494 TTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTA 196553 | || || || ||||| || ||||| | || | | ||||| || || ||||| | Sbjct 147991 TCGAGACGGCCGGTGGCGTGATGACGGTGCTGATCAAGCGCAACACCACGATCCCGACGA 148050 Query 196554 AGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTAT 196613 || || ||| || | ||||| || || || || || || || | || || || | Sbjct 148051 AGCAGACGCAAACGTTCACCACGTACTCGGACAACCAGCCCGGCGTGCTGATCCAGGTGT 148110 Query 196614 ATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGG 196673 ||||| || ||| | | ||||| ||| |||| || || | ||||| |||| | Sbjct 148111 TCGAAGGGGAGCGCGCGATGACGAAGGACAACAATCTGCTGGGCAAGTTCGAGTTGAGCG 148170 Query 196674 GGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAA 196733 | || || | || || | || || || ||||| | ||| ||||| || ||||| | Sbjct 148171 GCATCCCGCCGGCGCCGCGTGGCGTGCCCCAGATCGAGGTTACGTTCGACATCGACGCGA 148230 Query 196734 ATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG-ATTGTG 196792 | || || | ||||| | || || ||| | | | || ||| | || Sbjct 148231 ACGGCATCATGAACGTGTCGGCCATCGAGAAGTCCACCAAC-AAGGAGAACCGCATCACC 148289 Query 196793 ATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCG 196852 || ||||| |||||||| || || |||||||| || || || ||||| | || ||| Sbjct 148290 ATCACCAACGACAAGGGCCGCCTCAGCAAGGAGGACATCGATCGGATGGTGAACGAGGCG 148349 Query 196853 GAAAAGT 196859 || |||| Sbjct 148350 GAGAAGT 148356 >seq12585 Length=436458 Score = 127 bits (140), Expect = 3e-24 Identities = 319/478 (67%), Gaps = 9/478 (2%) Strand=Plus/Minus Query 195374 AATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTC 195433 || ||||| ||||| || || || || || || || || | || | || ||| | Sbjct 405848 AACGACCAGGGAAATCGAACGACGCCGAGCTATGTCGCGTTCTCGGACACGGAGCGTTTG 405789 Query 195434 GTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCG 195493 |||| || || || || || ||| || |||||||| | || || || || || || Sbjct 405788 ATTGGTGACGCGGCCAAGAACCAGGTGGCCATGAACCCGACAAACACAGTGTTCGATGCC 405729 Query 195494 AAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGG 195553 ||||| || || || ||||||| | || || | || | |||| | ||| ||||| Sbjct 405728 AAGCGGCTAATCGGACGCAAGTATGACGACCCCAAGATTCAGGCCGATCTGAAGCACTGG 405669 Query 195554 TCTTATGAAGTTGTTCCCGG-TGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGG 195612 | | ||| | || || ||| ||||| | |||| | || || || | || Sbjct 405668 CCGTTCACAGTAGCGAACGACTGCGGC----AAGCCGAAGATTCAGGTCGAGTTCAAAGG 405613 Query 195613 TGAGAAGAAACA-ATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGG 195671 || | | || | ||| | || ||||| || || |||||| ||| || ||||||| Sbjct 405612 AGA-ACGCAAGACATTCTCACCAGAAGAGATCAGTTCGATGGTGCTGACGAAAATGAAGG 405554 Query 195672 AGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTT 195731 | || |||||| | | ||||| | | ||||| | || || | || || || |||| Sbjct 405553 AAACGGCGGAAGCATATCTGGGTCAGTCCGTGAAGAACGCGGTCATCACAGTTCCAGCTT 405494 Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || || |||||||| |||||||| || | || || |||||||| || | Sbjct 405493 ACTTCAACGACAGCCAGCGACAGGCTACAAAGGATGCCGGCGCCATCGCGGGTCTGAA-T 405435 Query 195792 GTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGA 195848 || | |||| ||||| ||||| ||||| || || | ||||| ||||||||||||| Sbjct 405434 GTGATGCGAATCATCAACGAACCGACAGCTGCCGCGTTGGCTTACGGTCTGGACAAGA 405377 >seq23407 Length=300992 Score = 125 bits (138), Expect = 9e-24 Identities = 447/691 (65%), Gaps = 17/691 (2%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 ||||||||| | || || || ||||| || || ||||| | | || | ||| || || Sbjct 71811 GGTATCGATCTCGGCACGACGTACTCCTGCGTCGGTGTGTACAAGAACGGTCGCGTCGAA 71870 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || || || || ||||||| || || || ||||| || || || | | Sbjct 71871 ATCATCGCCAACGATCAGGGTAACCGTATCACGCCGTCCTACGTGGCATTCACCGCCGAC 71930 Query 195425 G---AACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | | |||||| | || || ||||| || || ||| | | |||||| || || Sbjct 71931 GGCGAGCGTCTCATCGGCGACGCCGCCAAGAACCAGCTGACGACGAACCCGGAGAACACG 71990 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| |||||||||||||| || ||||| | || | || | | || || |||| Sbjct 71991 GTCTTCGACGCGAAGCGTCTGATCGGTCGTGAATTCACCGACCACACCGTGCAGCACGAC 72050 Query 195542 ATAAAGGACTGGT-CTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA--T 195598 || ||| ||| | | | ||| || | | | || |||| || | | Sbjct 72051 ATCAAG--CTGCTGCCGTTCAAGGTGATTGAGAAGAACTCGA--AGCCACACATCAGGGT 72106 Query 195599 GTTGAATTTC-ACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | | || || ||| || || || || || || || | |||||| | Sbjct 72107 GTCGACCGGCCAGGGCGACAAGGTG---TTCGCCCCGGAGGAGATCTCCGCCATGGTGCT 72163 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||| || || || | | | |||| || | |||| | || || || Sbjct 72164 GGGCAAGATGAAGGAAACGGCCGAGGCGTACCTGGGCAAGAAGGTGACGCACGCCGTCGT 72223 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || | || || ||||| || |||||||| | | || Sbjct 72224 GACCGTTCCGGCCTACTTCAACGACGCGCAGCGTCAGGCAACGAAGGACGCGGGAACGAT 72283 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || | | | || ||||| ||||| || || || || || || || || Sbjct 72284 CGCCGGACTGGTGGTTATGCGCATCATCAACGAACCGACCGCCGCCGCCATCGCCTACGG 72343 Query 195838 TCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTAC 195897 |||||||||| ||||||| || || || || | | || ||||| ||||| ||||| Sbjct 72344 TCTGGACAAG---AAGGACGGTGAGAAGAACGTGCTCGTGTTCGATCTGGGTGGCGGTAC 72400 Query 195898 GTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGG 195957 || || || || || || | || || ||| | ||||| || ||| || || Sbjct 72401 CTTCGACGTGTCGCTGCTGACCATCGACAACGGTGTGTTCGAGGTGGTGGCCACCAACGG 72460 Query 195958 TGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||| || ||||| || ||||| || |||||| Sbjct 72461 TGACACCCATCTGGGCGGTGAGGACTTCGAT 72491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657579806982800