Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 349 3e-91
>seq2173
Length=41539
Score = 349 bits (386), Expect = 3e-91
Identities = 1206/1860 (65%), Gaps = 51/1860 (3%)
Strand=Plus/Minus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || || || |||| || |||| |||| || ||||| | || ||| ||||| ||
Sbjct 18573 TTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCC 18514
Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271
|| || | ||||| |||| | |||| | ||| ||||| || || |||| |||
Sbjct 18513 AGTCTTCAGGCCCATCTTCC-ACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCG 18455
Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331
||| ||||| ||||| ||||| || ||| |||||||| || || || || |
Sbjct 18454 GTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTG 18395
Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391
|||| | || | |||| |||||||| || || ||||| ||||| || | |
Sbjct 18394 CCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTT 18335
Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451
||||||| | || || || || |||||| || | ||| || |||
Sbjct 18334 CCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCA 18275
Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511
| ||||||| ||||| | || ||| || || ||||| | ||| | ||||
Sbjct 18274 TATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 18215
Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571
|||| || || | || || || || ||||| |||| || | ||||| ||||| |
Sbjct 18214 GAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACT 18155
Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631
||||||| |||| ||| || ||||| | || |||||||| ||| | || || || |
Sbjct 18154 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 18095
Query 138632 TCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688
| || | |||||| ||| || |||||| |||| || ||| | ||||| ||
Sbjct 18094 TGCGCACACCGTGT---TTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTCCG 18038
Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748
| ||| ||||||||||| |||||||| | || ||| || | ||| || ||||
Sbjct 18037 TCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGT 17978
Query 138749 ACGAATCGTATACACCAAACTCTTGCGC---CAACTCGTTGCTCGCCTCGAGCGCACCAT 138805
||| ||||| || ||| || || || |||| ||| || || |||||||| |
Sbjct 17977 ACGTCTCGTACGGTCC---CTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGT 17921
Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865
|||| || || || ||||||||||||||| | ||||| || ||||||||||| |
Sbjct 17920 AGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCGTACGGGA 17861
Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925
|| | || ||||||| || |||| || || ||||| | |||| || || ||||
Sbjct 17860 AGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGC 17801
Query 138926 GCAGATTTGA-CGCTT---TTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981
||| || || ||||| || |||| | || || |||| || ||||| || |||
Sbjct 17800 GCATGTTCGAGCGCTTCGCTTCCGGC----ACCGGGTAGAAGTTCACGTCGATAATCTTG 17745
Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCC 139040
|| || || ||| || | || | | |||| | | | | ||||| || || |
Sbjct 17744 TTCAAGTTGCGCGTCACGA-TTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGTAC- 17687
Query 139041 CCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100
|||| ||| | ||| || |||| | ||||||||| | |||||||||
Sbjct 17686 -----GGTCG--GAC----TGGACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACAC 17638
Query 139101 CGCCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGA 139159
||||||||||| | | || ||| || ||||| |||| || | ||| |||||||
Sbjct 17637 CGCCACTTCGTCCTTCGACG-AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 17579
Query 139160 TCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACG 139219
| || || | ||||| || |||||||| || || || || || ||||| ||||| ||||
Sbjct 17578 TGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 17519
Query 139220 GTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTT 139279
|| ||| || ||||| || | || || || ||| ||| || | || |
Sbjct 17518 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCT 17459
Query 139280 GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339
| || | | | | | || ||| || ||| | | ||||| ||| ||
Sbjct 17458 GGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCC 17399
Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399
| | || | | || |||| | || || ||||| | ||| |||||||||
Sbjct 17398 ACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCT 17339
Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459
|||||| ||||||||||||||||||||| | ||| | | || || || || |
Sbjct 17338 CCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCA 17279
Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519
|| ||| || |||| |||| | | || ||||| || || ||||||| |
Sbjct 17278 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACG 17219
Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTA 139576
| ||||| |||||||| | || || ||| ||||| || |||||||||| |||
Sbjct 17218 GCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTG 17159
Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTAC 139636
| | || ||| | ||||||| ||||||| ||| ||| ||| ||||||| |||| |
Sbjct 17158 CCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGC--C 17101
Query 139637 GGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAA 139694
||| | ||| | || |||| | || || || | ||||| || ||| || |
Sbjct 17100 GGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGA 17041
Query 139695 TTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753
||||| || | |||| | || | | || ||||| || ||| |||||||||||
Sbjct 17040 CTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGG 16982
Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813
||| || | ||||||||| ||||| || || || | | ||| | || || |||| |
Sbjct 16981 ACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATGG 16922
Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCA 139873
| || || || || || | | ||| | || | ||||| ||||| || |
Sbjct 16921 TCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCT 16862
Query 139874 CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGG 139933
| || ||| | || ||||| |||| | ||| |||||||||||||| || || |||
Sbjct 16861 CGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGA 16802
Query 139934 CCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991
| | | ||||| ||| || || ||| | || ||| ||||| ||| |||| || ||
Sbjct 16801 CAATCTTGCCCTTGATCTTCAACAAATACGAACG--CTCCAGGGTTTTGAAGCCGAAATA 16744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449704340862200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |