Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2173 349 3e-91 >seq2173 Length=41539 Score = 349 bits (386), Expect = 3e-91 Identities = 1206/1860 (65%), Gaps = 51/1860 (3%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || || || |||| || |||| |||| || ||||| | || ||| ||||| || Sbjct 18573 TTTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCC 18514 Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 || || | ||||| |||| | |||| | ||| ||||| || || |||| ||| Sbjct 18513 AGTCTTCAGGCCCATCTTCC-ACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCG 18455 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| ||||| ||||| ||||| || ||| |||||||| || || || || | Sbjct 18454 GTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTG 18395 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| | || | |||| |||||||| || || ||||| ||||| || | | Sbjct 18394 CCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTT 18335 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 ||||||| | || || || || |||||| || | ||| || ||| Sbjct 18334 CCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCA 18275 Query 138452 TGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCT 138511 | ||||||| ||||| | || ||| || || ||||| | ||| | |||| Sbjct 18274 TATCATCGTCCCACAGACCGTGCGTGGTCAGATCCTTGATCAGGTGGTGGTTCACCACCT 18215 Query 138512 GAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATT 138571 |||| || || | || || || || ||||| |||| || | ||||| ||||| | Sbjct 18214 GAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACT 18155 Query 138572 CGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAAT 138631 ||||||| |||| ||| || ||||| | || |||||||| ||| | || || || | Sbjct 18154 CGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGT 18095 Query 138632 TCCGTAAACCGTGAAGCTTG---ATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688 | || | |||||| ||| || |||||| |||| || ||| | ||||| || Sbjct 18094 TGCGCACACCGTGT---TTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTCCG 18038 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748 | ||| ||||||||||| |||||||| | || ||| || | ||| || |||| Sbjct 18037 TCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGT 17978 Query 138749 ACGAATCGTATACACCAAACTCTTGCGC---CAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 ||| ||||| || ||| || || || |||| ||| || || |||||||| | Sbjct 17977 ACGTCTCGTACGGTCC---CTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGT 17921 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 |||| || || || ||||||||||||||| | ||||| || ||||||||||| | Sbjct 17920 AGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCGTACGGGA 17861 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 || | || ||||||| || |||| || || ||||| | |||| || || |||| Sbjct 17860 AGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGC 17801 Query 138926 GCAGATTTGA-CGCTT---TTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981 ||| || || ||||| || |||| | || || |||| || ||||| || ||| Sbjct 17800 GCATGTTCGAGCGCTTCGCTTCCGGC----ACCGGGTAGAAGTTCACGTCGATAATCTTG 17745 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCC 139040 || || || ||| || | || | | |||| | | | | ||||| || || | Sbjct 17744 TTCAAGTTGCGCGTCACGA-TTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGTAC- 17687 Query 139041 CCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACAC 139100 |||| ||| | ||| || |||| | ||||||||| | ||||||||| Sbjct 17686 -----GGTCG--GAC----TGGACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACAC 17638 Query 139101 CGCCACTTCGT-CGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGA 139159 ||||||||||| | | || ||| || ||||| |||| || | ||| ||||||| Sbjct 17637 CGCCACTTCGTCCTTCGACG-AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGA 17579 Query 139160 TCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACG 139219 | || || | ||||| || |||||||| || || || || || ||||| ||||| |||| Sbjct 17578 TGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACG 17519 Query 139220 GTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTT 139279 || ||| || ||||| || | || || || ||| ||| || | || | Sbjct 17518 GTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCCTTTACCT 17459 Query 139280 GACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGT 139339 | || | | | | | || ||| || ||| | | ||||| ||| || Sbjct 17458 GGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCC 17399 Query 139340 AGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCT 139399 | | || | | || |||| | || || ||||| | ||| ||||||||| Sbjct 17398 ACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCT 17339 Query 139400 TGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCT 139459 |||||| ||||||||||||||||||||| | ||| | | || || || || | Sbjct 17338 CCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCA 17279 Query 139460 TATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATG 139519 || ||| || |||| |||| | | || ||||| || || ||||||| | Sbjct 17278 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACG 17219 Query 139520 GTTCCAGATAGATGGCCATTGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTA 139576 | ||||| |||||||| | || || ||| ||||| || |||||||||| ||| Sbjct 17218 GCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTG 17159 Query 139577 CAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTAC 139636 | | || ||| | ||||||| ||||||| ||| ||| ||| ||||||| |||| | Sbjct 17158 CCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGC--C 17101 Query 139637 GGATGGGACTGTTGC--GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAA 139694 ||| | ||| | || |||| | || || || | ||||| || ||| || | Sbjct 17100 GGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGA 17041 Query 139695 TTTGGATATTAAAACGCAATCGCGT-AATGTCTCGTATATACCTCTTATGCTGTCGTCCT 139753 ||||| || | |||| | || | | || ||||| || ||| ||||||||||| Sbjct 17040 CTTGGAGATCAGTGCGCACT-GCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGG 16982 Query 139754 GCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAG 139813 ||| || | ||||||||| ||||| || || || | | ||| | || || |||| | Sbjct 16981 ACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATGG 16922 Query 139814 TAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCA 139873 | || || || || || | | ||| | || | ||||| ||||| || | Sbjct 16921 TCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCT 16862 Query 139874 CAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGG 139933 | || ||| | || ||||| |||| | ||| |||||||||||||| || || ||| Sbjct 16861 CGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGA 16802 Query 139934 CCACCGCGCCCTCGAtttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTA 139991 | | | ||||| ||| || || ||| | || ||| ||||| ||| |||| || || Sbjct 16801 CAATCTTGCCCTTGATCTTCAACAAATACGAACG--CTCCAGGGTTTTGAAGCCGAAATA 16744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449704340862200