Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq7262 145 6e-30
>seq7262
Length=177403
Score = 145 bits (160), Expect = 6e-30
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503
||||| || || || || ||||| ||||||||||| ||||| || |||| || || ||
Sbjct 142573 TGCGTCTGAGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGATAGGTGGCGGGGCGACCG 142514
Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563
| ||| | || | ||| | |||||| ||||| || |||||||||||||| || || ||
Sbjct 142513 ATCGCTCTAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCTTTACCC 142454
Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623
|| |||||||| |||||| ||||| ||||| ||||||||| || | ||| || |||
Sbjct 142453 TCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAACATATCGGTCACGTTACGG 142394
Query 34624 TTAACGTTCACAGTCCCCAT 34643
|| ||||| || || ||||
Sbjct 142393 TTCACGTTTACGGTAGCCAT 142374
Score = 145 bits (160), Expect = 6e-30
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503
||||| || || || || ||||| ||||||||||| ||||| || |||| || || ||
Sbjct 148932 TGCGTCTGAGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGATAGGTGGCGGGGCGACCG 148873
Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563
| ||| | || | ||| | |||||| ||||| || |||||||||||||| || || ||
Sbjct 148872 ATCGCTCTAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCTTTACCC 148813
Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623
|| |||||||| |||||| ||||| ||||| ||||||||| || | ||| || |||
Sbjct 148812 TCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAACATATCGGTCACGTTACGG 148753
Query 34624 TTAACGTTCACAGTCCCCAT 34643
|| ||||| || || ||||
Sbjct 148752 TTCACGTTTACGGTAGCCAT 148733
Score = 125 bits (138), Expect = 6e-24
Identities = 170/236 (72%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262
||||||||| || | ||||| ||||| | ||| || || | |||| ||||| |
Sbjct 143196 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 143137
Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322
||||| || ||||| ||||| |||| | ||| || | || || || || || ||
Sbjct 143136 GCCGCACGCCTTGCATCCCTGCGAGATCGTACCCTTCTTCGACGAAACTATCAGGTCCGT 143077
Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382
||||||||| || || ||||| |||| || ||| ||| ||||| ||||| ||||||||
Sbjct 143076 CTCCGGGTTATCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCGAGCAGGTC 143017
Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||| | ||| || ||||| | ||||| || ||||| |||||| || ||||||
Sbjct 143016 CTGCAGCTTGGTGGCATCGTGCGCACCGTTCACAATGAAGCGTTCG-TTCTGTAAT 142962
Score = 125 bits (138), Expect = 6e-24
Identities = 170/236 (72%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262
||||||||| || | ||||| ||||| | ||| || || | |||| ||||| |
Sbjct 149555 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 149496
Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322
||||| || ||||| ||||| |||| | ||| || | || || || || || ||
Sbjct 149495 GCCGCACGCCTTGCATCCCTGCGAGATCGTACCCTTCTTCGACGAAACTATCAGGTCCGT 149436
Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382
||||||||| || || ||||| |||| || ||| ||| ||||| ||||| ||||||||
Sbjct 149435 CTCCGGGTTATCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCGAGCAGGTC 149376
Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438
||| | ||| || ||||| | ||||| || ||||| |||||| || ||||||
Sbjct 149375 CTGCAGCTTGGTGGCATCGTGCGCACCGTTCACAATGAAGCGTTCG-TTCTGTAAT 149321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412668692261945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |