Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7262 145 6e-30 >seq7262 Length=177403 Score = 145 bits (160), Expect = 6e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 ||||| || || || || ||||| ||||||||||| ||||| || |||| || || || Sbjct 142573 TGCGTCTGAGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGATAGGTGGCGGGGCGACCG 142514 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| | || | ||| | |||||| ||||| || |||||||||||||| || || || Sbjct 142513 ATCGCTCTAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCTTTACCC 142454 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || |||||||| |||||| ||||| ||||| ||||||||| || | ||| || ||| Sbjct 142453 TCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAACATATCGGTCACGTTACGG 142394 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || ||||| || || |||| Sbjct 142393 TTCACGTTTACGGTAGCCAT 142374 Score = 145 bits (160), Expect = 6e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34444 TGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCA 34503 ||||| || || || || ||||| ||||||||||| ||||| || |||| || || || Sbjct 148932 TGCGTCTGAGCTCCAAGTTCGCAACCGAAGTACTTGGTCGGATAGGTGGCGGGGCGACCG 148873 Query 34504 AGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCT 34563 | ||| | || | ||| | |||||| ||||| || |||||||||||||| || || || Sbjct 148872 ATCGCTCTAGCCACTTCCGCCATGTTCACGATCACCGTCTTGATGCCGTTTCCTTTACCC 148813 Query 34564 TCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGG 34623 || |||||||| |||||| ||||| ||||| ||||||||| || | ||| || ||| Sbjct 148812 TCTACCTTGGCATTGATGCGAGGCATCTTGTACCGGTAGAACATATCGGTCACGTTACGG 148753 Query 34624 TTAACGTTCACAGTCCCCAT 34643 || ||||| || || |||| Sbjct 148752 TTCACGTTTACGGTAGCCAT 148733 Score = 125 bits (138), Expect = 6e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || || | |||| ||||| | Sbjct 143196 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 143137 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||| ||||| |||| | ||| || | || || || || || || Sbjct 143136 GCCGCACGCCTTGCATCCCTGCGAGATCGTACCCTTCTTCGACGAAACTATCAGGTCCGT 143077 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||||||| || || ||||| |||| || ||| ||| ||||| ||||| |||||||| Sbjct 143076 CTCCGGGTTATCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCGAGCAGGTC 143017 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||| | ||| || ||||| | ||||| || ||||| |||||| || |||||| Sbjct 143016 CTGCAGCTTGGTGGCATCGTGCGCACCGTTCACAATGAAGCGTTCG-TTCTGTAAT 142962 Score = 125 bits (138), Expect = 6e-24 Identities = 170/236 (72%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||||||||| || | ||||| ||||| | ||| || || | |||| ||||| | Sbjct 149555 CGGCGGGTTCTTGATGATGAACGTGTTCACCTTGTGGTTGACCTCGAGCGGACCGTGGAA 149496 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| || ||||| ||||| |||| | ||| || | || || || || || || Sbjct 149495 GCCGCACGCCTTGCATCCCTGCGAGATCGTACCCTTCTTCGACGAAACTATCAGGTCCGT 149436 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 ||||||||| || || ||||| |||| || ||| ||| ||||| ||||| |||||||| Sbjct 149435 CTCCGGGTTATCGCACTCCGGGCACAGGACGAACCGGCGAATGAATCCATCGAGCAGGTC 149376 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 ||| | ||| || ||||| | ||||| || ||||| |||||| || |||||| Sbjct 149375 CTGCAGCTTGGTGGCATCGTGCGCACCGTTCACAATGAAGCGTTCG-TTCTGTAAT 149321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412668692261945