Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq17588 86.0 1e-11 >seq17588 Length=255762 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 183003 GGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAA 183062 ||| ||||| || ||| || |||||||| | || | |||||| || | || | || Sbjct 178138 GGCCGAAACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAA 178079 Query 183063 AATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCC 183122 ||||| | ||| | || ||||||||||| || |||||||| || ||||| |||| || Sbjct 178078 GATGCACGGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCC 178019 Query 183123 GGAAGATGC-TTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACG 183180 ||| || || | ||| | | ||||| ||||| || ||| || ||||| Sbjct 178018 GGAGGAGGCGCTCGAG--ACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGC 177961 Query 183181 GATCCTAACGGATACGTAGGTTGTATGTGGTCTAT 183215 || || ||||| ||||| || || |||||||| || Sbjct 177960 GACCCGAACGGGTACGTCGGGTGCATGTGGTCGAT 177926 Score = 86.0 bits (94), Expect = 1e-11 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 183003 GGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAA 183062 ||| ||||| || ||| || |||||||| | || | |||||| || | || | || Sbjct 180020 GGCCGAAACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAA 179961 Query 183063 AATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCC 183122 ||||| | ||| | || ||||||||||| || |||||||| || ||||| |||| || Sbjct 179960 GATGCACGGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCC 179901 Query 183123 GGAAGATGC-TTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACG 183180 ||| || || | ||| | | ||||| ||||| || ||| || ||||| Sbjct 179900 GGAGGAGGCGCTCGAG--ACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGC 179843 Query 183181 GATCCTAACGGATACGTAGGTTGTATGTGGTCTAT 183215 || || ||||| ||||| || || |||||||| || Sbjct 179842 GACCCGAACGGGTACGTCGGGTGCATGTGGTCGAT 179808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903023128426400