Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2173 571 6e-158 >seq2173 Length=41539 Score = 571 bits (632), Expect = 6e-158 Identities = 1194/1755 (68%), Gaps = 38/1755 (2%) Strand=Plus/Minus Query 147942 GCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCG 148001 ||||| | ||||||| |||||||||||| ||||| |||||||| ||| |||| | | Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAG 18483 Query 148002 TGCACCGACGACATGAGCGTG---TACGTCGGGTGCGGCACAAACAGATTAAACGACTGG 148058 |||| ||||| || || || || |||| | || ||| | || |||||||| Sbjct 18482 TGCATCGACGTCA---GCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGC 18426 Query 148059 CTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTT-ATCTTCAT 148117 |||||| |||||||| || ||||| || ||||| | ||| || ||| | | || Sbjct 18425 GACTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA-CGTTTTCACCGAAAT 18367 Query 148118 CTCCCAGGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCA 148176 |||||| |||| |||||||| ||| | |||| | | | |||||| ||| | Sbjct 18366 CTCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGC-TCGATGTTCTGGA 18308 Query 148177 CCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGA 148236 ||||||| ||| || | || || ||| || || | || | || | Sbjct 18307 TCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGTGCGTGG 18248 Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 |||| || | |||||| | || |||||||||||||||||||| | || |||||||| Sbjct 18247 TCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGT 18188 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || |||||| |||| |||| || ||||||||||||||||||||||| || || |||| Sbjct 18187 TGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCG 18128 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 ||||| ||||| ||| | |||||| |||||||||| |||| | || || || Sbjct 18127 AAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTT 18068 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCA 148476 |||||| | |||||| | ||| || || |||| | |||||||||||||||||||| Sbjct 18067 CCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCA 18008 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 ||||||| ||| | || |||||||||| ||||||||| | | || |||| Sbjct 18007 GAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCA 17948 Query 148537 GTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA 148596 |||||||| || || ||||| |||||||| || ||||| || ||| |||||| Sbjct 17947 TCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCT 17888 Query 148597 GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCT 148656 | |||| | | || |||||||| | | || | | ||||| || || | |||| Sbjct 17887 TCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCT 17828 Query 148657 GTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC-GCGCTCTCG--AGCG 148713 | ||||| | || || || ||||| ||||| || |||| |||| || | || Sbjct 17827 GGACGCCGATACCGATCGGACGGTGGCGCATGTTCGA---GCGCTTCGCTTCCGGCACCG 17771 Query 148714 GATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTG-TAATTCT 148771 | ||| ||| |||||| |||||| ||||| |||||| ||| | || | || ||| Sbjct 17770 GGTAGAAGTTCACGTCGATAATCTTGTTCAAG-TTGCGCGTCACGATTTTGGCTACCTCT 17712 Query 148772 GCGCAGCAATTCAAAATCGTACTT---GTC---ATCTACGATGCATCGGTTCACGGCGAT 148825 |||| | ||||| ||| | ||| | |||| ||| ||||| || || Sbjct 17711 -TTCAGCTTCGCGAAATCATACGTACGGTCGGACTGGACGA-ACAT--GTTCAACGCAAT 17656 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 ||||| || |||||||| ||| || ||| | |||||| || ||||||| ||| Sbjct 17655 CGAGGCCAGGTTGCACACCGCCACTTCGTCCTTCGACGAGTACTCCACAATCTCGGTGCA 17596 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 || || ||| ||||| ||| | ||| | || ||||| |||| ||||||||||| Sbjct 17595 AAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTC 17536 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT--GAACCGATGC 149003 ||||||||||||||||||| |||| || |||||||| | ||| | || || | | | Sbjct 17535 CTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCA--C 17478 Query 149004 AGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGC 149063 || |||||||| || || | | |||| ||||||| ||| || || |||| | Sbjct 17477 AGATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAAC 17418 Query 149064 CGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGC 149123 ||||||| | ||||| | ||||| | | ||||| || | |||||||||||| | Sbjct 17417 TTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAA 17358 Query 149124 GACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTAC 149183 |||| ||| ||| | |||||||| ||| |||||||| || | |||||||||||| Sbjct 17357 CTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAG 17298 Query 149184 ATGAGGTCGCGCGCCTTGCA-GTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | | ||| || | | ||| || || ||| |||| ||| | | | Sbjct 17297 AACATGTCCCGTG-CGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTC 17239 Query 149243 GAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCC 149299 || | || ||||||||||||| | ||| | || | ||| ||| ||| ||||| Sbjct 17238 AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCC 17179 Query 149300 GCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACT 149359 |||||| ||||||| || || ||||||| |||| || | ||| || | | || | Sbjct 17178 GCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTT 17119 Query 149360 GGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGAC 149419 | | | ||||| || | ||| | || ||| || | ||||||||| | Sbjct 17118 CGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAG 17059 Query 149420 GCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGCC 149479 |||||||| ||| | |||| ||||| ||||| | ||||| ||||||||| Sbjct 17058 CCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCC 16999 Query 149480 CTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGT 149539 |||||||||||| |||||||||||||||||| || ||| || ||| |||| Sbjct 16998 TTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGT 16939 Query 149540 GCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTA 149599 | |||||||||||||| || ||| || ||||| || || | || | || Sbjct 16938 AGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATA 16879 Query 149600 CGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCAT 149659 || ||||| | | || ||||| |||||||||||| |||||||||||||||||||| Sbjct 16878 CGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCAT 16819 Query 149660 ATGCTGCGGTCGCTC 149674 ||||||||| | ||| Sbjct 16818 ATGCTGCGGCCTCTC 16804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483213140552600