Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 423 2e-113
>seq2173
Length=41539
Score = 423 bits (468), Expect = 2e-113
Identities = 1229/1865 (66%), Gaps = 48/1865 (3%)
Strand=Plus/Minus
Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633
|| || || ||||||||||| |||||||| || || ||||| |||| ||||| |||
Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCC-CATCTTCCACGCGTGGAA 18484
Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693
||| ||||| |||| || |||| |||| ||||||||| | || ||||| ||
Sbjct 18483 GTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGA 18424
Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTCATT- 146751
|| || ||||| || |||||||| ||||||| || || |||||| | | |
Sbjct 18423 CTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA--CGTTTTCACCGAAATC 18366
Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811
|||||| | ||||||||||| | || | || || || ||||| || ||
Sbjct 18365 TCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATC 18306
Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTT--TCGTATT-TCGGGCGTGTAAAGGTTTAGTTTA 146868
||||| ||||| || | || ||||| || ||| ||| | | || | |
Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGT---GCGTG 18249
Query 146869 ATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928
| || || | || | | || || ||||| ||||||||||||| ||| || || | |
Sbjct 18248 GTCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGG 18189
Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988
|| || ||| || | ||||| || ||||| || ||||| || ||||| |||||
Sbjct 18188 TTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTC 18129
Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGT 147046
| || || ||||| ||| | || || ||| || |||| ||||| | || || |
Sbjct 18128 GAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGT--GTTTGGCAATCT 18071
Query 147047 TGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACT 147106
| ||||||| || ||| | ||||| || || | |||||||||||||||||
Sbjct 18070 TTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACT 18011
Query 147107 GGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG 147166
| || | || || | ||| || || |||| ||| ||| || | |
Sbjct 18010 GCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGG 17951
Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226
||| || ||||| || || ||||| || ||||| ||||| || || || | || |
Sbjct 17950 CCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGA 17891
Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286
| ||| || | |||||||| || | | || | | || ||||| |||| ||
Sbjct 17890 GCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATAC 17831
Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346
|||||| |||| ||||| || || || ||| ||||||||| || | |
Sbjct 17830 CCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCG 17771
Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406
| ||| ||| || ||||||||||| | ||| ||| || | ||| | || ||
Sbjct 17770 GGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTT 17711
Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAG 147466
| || ||| |||||||||| || | ||| ||| | ||| | ||||| || || |
Sbjct 17710 TCAGCTTCGCGAAATCATACGTACGGTCG--GACTGG-ACGAACATGTTCAACGCAATCG 17654
Query 147467 ACGCCAGATTGCAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGC 147521
| ||||| ||||| || ||| ||| ||||| || ||||| ||| || ||||
Sbjct 17653 AGGCCAGGTTGCACACCGCCACTTCGTC-CTTCGACGA----GTACTCCACAATCTCGGT 17599
Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581
||| ||||| ||| || ||| || | |||||||| |||||||| |||||||||||
Sbjct 17598 GCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGC 17539
Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCT 147638
||| ||| | |||||||||||| |||| ||||| || || | ||| | ||| |||||
Sbjct 17538 GTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACC- 17480
Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696
||| |||||||| ||| | || ||| |||||||||| || || || | | |
Sbjct 17479 --ACAGATCCTGCGCCTTTACCTG--GCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTG 17424
Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756
|||||| ||| ||||| ||||| | ||||||| | |||||||| | ||||| |||
Sbjct 17423 TACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCAC 17364
Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816
|||| |||| | |||| ||| | ||||| |||| ||||||||||| | ||| |||
Sbjct 17363 ATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGC 17304
Query 147817 GCGTACATAAGATCGCGCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAA 147874
||||| | | || || || ||| ||||| ||| |||| |||| || ||
Sbjct 17303 GCGTAGAACATGTCCCGTGC-GCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAA 17245
Query 147875 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC- 147933
|| | | | | ||| ||||||| || || | ||||| ||| | |||||| |||
Sbjct 17244 AAACTC-AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCT 17186
Query 147934 --TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCA 147991
|| |||||||| ||||| | || || ||||||| ||||||||| ||| || |||
Sbjct 17185 TATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCA 17126
Query 147992 GGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051
||| ||| | | ||||| ||| ||| | | || || || | |||||
Sbjct 17125 ACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCA 17066
Query 148052 CGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGT 148111
|||| | || ||||| ||| | |||| || || ||||| | || || ||
Sbjct 17065 CGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGT 17006
Query 148112 AGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAA 148171
||||||| ||||||||||||| | | |||| ||| || || ||| || |||
Sbjct 17005 AGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGAC 16946
Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231
| |||| |||||| ||| | ||| || || || ||||| | | | ||
Sbjct 16945 GCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCA 16886
Query 148232 TGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCA 148291
||||||||| || || | |||||||| ||| || ||||| | ||||||||||
Sbjct 16885 GATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCA 16826
Query 148292 TGAGCATGTGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTT 148350
| ||||| ||||| || | ||| ||| |||| |||||||| | | ||| |
Sbjct 16825 TCAGCATATGCTGCGGCCTCTCGACAATCTTG-CCCTTGATCTTCAACAAATACGAACGC 16767
Query 148351 TCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCA 148410
|| ||||||||| | || || || ||||| | || || | |||||| || |||| |
Sbjct 16766 TCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAA 16707
Query 148411 TCTAG 148415
| |||
Sbjct 16706 TTTAG 16702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476406465701400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |