Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2173 423 2e-113 >seq2173 Length=41539 Score = 423 bits (468), Expect = 2e-113 Identities = 1229/1865 (66%), Gaps = 48/1865 (3%) Strand=Plus/Minus Query 146575 GCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATT 146633 || || || ||||||||||| |||||||| || || ||||| |||| ||||| ||| Sbjct 18542 GCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTCAGGCC-CATCTTCCACGCGTGGAA 18484 Query 146634 GTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCT 146693 ||| ||||| |||| || |||| |||| ||||||||| | || ||||| || Sbjct 18483 GTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCCACGTGGATGTTGAACGACTGCGA 18424 Query 146694 TTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCAAT-CATGCGTTTTGTCTTCATT- 146751 || || ||||| || |||||||| ||||||| || || |||||| | | | Sbjct 18423 CTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGGATGCA--CGTTTTCACCGAAATC 18366 Query 146752 TCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATA 146811 |||||| | ||||||||||| | || | || || || ||||| || || Sbjct 18365 TCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATC 18306 Query 146812 GAGCCCTTGTGCGCAAAAATAGTGTT--TCGTATT-TCGGGCGTGTAAAGGTTTAGTTTA 146868 ||||| ||||| || | || ||||| || ||| ||| | | || | | Sbjct 18305 GAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCATCGTCCCACAGACCGT---GCGTG 18249 Query 146869 ATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTG 146928 | || || | || | | || || ||||| ||||||||||||| ||| || || | | Sbjct 18248 GTCAGATCCTTGATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGG 18189 Query 146929 AGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTG 146988 || || ||| || | ||||| || ||||| || ||||| || ||||| ||||| Sbjct 18188 TTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTC 18129 Query 146989 GTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTACGCACGG--ATGT 147046 | || || ||||| ||| | || || ||| || |||| ||||| | || || | Sbjct 18128 GAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGT--GTTTGGCAATCT 18071 Query 147047 TGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACT 147106 | ||||||| || ||| | ||||| || || | ||||||||||||||||| Sbjct 18070 TTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACT 18011 Query 147107 GGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG 147166 | || | || || | ||| || || |||| ||| ||| || | | Sbjct 18010 GCAGAATGCCCTTGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGG 17951 Query 147167 CCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTA 147226 ||| || ||||| || || ||||| || ||||| ||||| || || || | || | Sbjct 17950 CCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGA 17891 Query 147227 GGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAAC 147286 | ||| || | |||||||| || | | || | | || ||||| |||| || Sbjct 17890 GCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATAC 17831 Query 147287 CCTGGATACCGACGCCGATAGGTCGATGCTTTTCGTTGCTGCGCTTCGCGCTCGCTATGG 147346 |||||| |||| ||||| || || || ||| ||||||||| || | | Sbjct 17830 CCTGGACGCCGATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCG 17771 Query 147347 GATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTT 147406 | ||| ||| || ||||||||||| | ||| ||| || | ||| | || || Sbjct 17770 GGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTT 17711 Query 147407 TGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGTACGCATTGGTTCACGGCGATAG 147466 | || ||| |||||||||| || | ||| ||| | ||| | ||||| || || | Sbjct 17710 TCAGCTTCGCGAAATCATACGTACGGTCG--GACTGG-ACGAACATGTTCAACGCAATCG 17654 Query 147467 ACGCCAGATTGCAGACGGCC-----GTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGC 147521 | ||||| ||||| || ||| ||| ||||| || ||||| ||| || |||| Sbjct 17653 AGGCCAGGTTGCACACCGCCACTTCGTC-CTTCGACGA----GTACTCCACAATCTCGGT 17599 Query 147522 GCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGC 147581 ||| ||||| ||| || ||| || | |||||||| |||||||| ||||||||||| Sbjct 17598 GCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGC 17539 Query 147582 GTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCT 147638 ||| ||| | |||||||||||| |||| ||||| || || | ||| | ||| ||||| Sbjct 17538 GTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACC- 17480 Query 147639 ATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT--AGCGGCCCTCGTTTTCGTACCGCTCG 147696 ||| |||||||| ||| | || ||| |||||||||| || || || | | | Sbjct 17479 --ACAGATCCTGCGCCTTTACCTG--GCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTG 17424 Query 147697 TACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACAC 147756 |||||| ||| ||||| ||||| | ||||||| | |||||||| | ||||| ||| Sbjct 17423 TACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCAC 17364 Query 147757 ATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGC 147816 |||| |||| | |||| ||| | ||||| |||| ||||||||||| | ||| ||| Sbjct 17363 ATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGC 17304 Query 147817 GCGTACATAAGATCGCGCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTCAAAT-TAA 147874 ||||| | | || || || ||| ||||| ||| |||| |||| || || Sbjct 17303 GCGTAGAACATGTCCCGTGC-GCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAA 17245 Query 147875 GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGC- 147933 || | | | | ||| ||||||| || || | ||||| ||| | |||||| ||| Sbjct 17244 AAACTC-AAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCT 17186 Query 147934 --TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCA 147991 || |||||||| ||||| | || || ||||||| ||||||||| ||| || ||| Sbjct 17185 TATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCA 17126 Query 147992 GGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCA 148051 ||| ||| | | ||||| ||| ||| | | || || || | ||||| Sbjct 17125 ACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCA 17066 Query 148052 CGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGT 148111 |||| | || ||||| ||| | |||| || || ||||| | || || || Sbjct 17065 CGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGT 17006 Query 148112 AGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAA 148171 ||||||| ||||||||||||| | | |||| ||| || || ||| || ||| Sbjct 17005 AGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGAC 16946 Query 148172 TCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCA 148231 | |||| |||||| ||| | ||| || || || ||||| | | | || Sbjct 16945 GCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCA 16886 Query 148232 TGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCA 148291 ||||||||| || || | |||||||| ||| || ||||| | |||||||||| Sbjct 16885 GATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATGCCGATGGCGACGCGCA 16826 Query 148292 TGAGCATGTGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTT 148350 | ||||| ||||| || | ||| ||| |||| |||||||| | | ||| | Sbjct 16825 TCAGCATATGCTGCGGCCTCTCGACAATCTTG-CCCTTGATCTTCAACAAATACGAACGC 16767 Query 148351 TCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCA 148410 || ||||||||| | || || || ||||| | || || | |||||| || |||| | Sbjct 16766 TCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTCACGATCGTAAATAATAGCCGAA 16707 Query 148411 TCTAG 148415 | ||| Sbjct 16706 TTTAG 16702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476406465701400