Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 98.7 9e-16
>seq2173
Length=41539
Score = 98.7 bits (108), Expect = 9e-16
Identities = 341/528 (65%), Gaps = 8/528 (2%)
Strand=Plus/Minus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| ||||| ||||| | ||| |||| || || || | || |||||||||||| |||||
Sbjct 18566 ACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTC 18507
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
| ||| ||| ||| | | || || || | || | ||| |||| || |||
Sbjct 18506 AGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCC 18447
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
||| | || | ||| || ||| |||||| | | || ||||| || ||||| |
Sbjct 18446 ACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGG 18387
Query 136819 AATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876
| | || |||| | ||| |||||| | ||||| | || || || | ||
Sbjct 18386 AT--GCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCG 18329
Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA- 136935
| |||| ||||| ||||| | || ||||||| | |||| | || | | ||||
Sbjct 18328 GTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCAT 18269
Query 136936 -GTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994
||| | || ||| | || | | || || || || || || || ||| |
Sbjct 18268 CGTCCCACAGACCGTGCGTGGTCAGA--TCCTTGATCAGGTGGTGGTTCACCACCTGAAA 18211
Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054
|||||||| || || | || ||| | || || ||||||||||||| |||||
Sbjct 18210 CTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTT 18151
Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114
||| |||||||| ||||| |||| || |||||||| |||| || || ||| || ||
Sbjct 18150 GTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCG 18091
Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAG 137162
| ||||||| ||| | | || ||| ||| ||| ||||||||
Sbjct 18090 CACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAG 18043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444903204136800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |