Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2173 98.7 9e-16 >seq2173 Length=41539 Score = 98.7 bits (108), Expect = 9e-16 Identities = 341/528 (65%), Gaps = 8/528 (2%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| ||||| | ||| |||| || || || | || |||||||||||| ||||| Sbjct 18566 ACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCCAGTCTTC 18507 Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758 | ||| ||| ||| | | || || || | || | ||| |||| || ||| Sbjct 18506 AGGCCCATCTTCCACGCGTGGAAGTGCATCGACGTCAGCTTGCCGTAGTTCGGTTCCGCC 18447 Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818 ||| | || | ||| || ||| |||||| | | || ||||| || ||||| | Sbjct 18446 ACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCGGCTGCCATCTGG 18387 Query 136819 AATAGTACTTTTTG--CTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 | | || |||| | ||| |||||| | ||||| | || || || | || Sbjct 18386 AT--GCACGTTTTCACCGAAATCTCCCAAACCGTTTTGTACAGATCGCGCACTTCCTTCG 18329 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTTTTTGATGATTTTCATCATGAGATCA- 136935 | |||| ||||| ||||| | || ||||||| | |||| | || | | |||| Sbjct 18328 GTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTTCTTCATATCAT 18269 Query 136936 -GTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGATA 136994 ||| | || ||| | || | | || || || || || || || ||| | Sbjct 18268 CGTCCCACAGACCGTGCGTGGTCAGA--TCCTTGATCAGGTGGTGGTTCACCACCTGAAA 18211 Query 136995 TTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGTT 137054 |||||||| || || | || ||| | || || ||||||||||||| ||||| Sbjct 18210 CTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGACTCGTT 18151 Query 137055 GTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAATTCCG 137114 ||| |||||||| ||||| |||| || |||||||| |||| || || ||| || || Sbjct 18150 GTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAGTTGCG 18091 Query 137115 TAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAG 137162 | ||||||| ||| | | || ||| ||| ||| |||||||| Sbjct 18090 CACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAG 18043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444903204136800