Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2173 147 2e-30 >seq2173 Length=41539 Score = 147 bits (162), Expect = 2e-30 Identities = 284/416 (68%), Gaps = 5/416 (1%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || |||||| ||||||| || | ||||| || ||| ||||| || || || | Sbjct 16813 CAGCATATGCTGATGCGCGTCGCCATCGGCATCCATGGCACGGACATCGAGGCTGCGATC 16872 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || ||||| | || | || | | ||||| || || ||||| |||||||| || Sbjct 16873 GAGACGTATAATCTGCTCTCGGAGCGTTACTTTACCCATGCCTCGCCGACCATGTTCGCG 16932 Query 7684 GCGGGCACAAACGCG-CCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 |||| || | ||| || || |||| || || ||| |||| |||||| ||| ||||| Sbjct 16933 GCGGCTACGCA-GCGTCCCCAGCTGTCGTCTTGCTTTCTGCTGACCATGTCCGACGACAG 16991 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGG 7802 |||||| ||||| ||| |||||||| | ||||| || ||||| | | ||| || Sbjct 16992 CATCGAAGGCATCTACGACACGCTGAAGCAGTGCGCACTGATCTCCAAGTCTGCCGGTGG 17051 Query 7803 AATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGG 7862 || || |||||||| || | | || || || || | |||| ||| ||||| Sbjct 17052 CATCGGGCTGAACGTGCACTGCATCCGGGCGAAGGGAACGTACATCTCCGGCACGAACGG 17111 Query 7863 AAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGA 7922 || | | ||| || | ||| ||| ||||||||| ||| ||| ||| || | || || Sbjct 17112 AATTTCGAACGGGTTGGTGCCGATGCTGCGCGTGTACAACAACACGGCACGGTACGTCGA 17171 Query 7923 CCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACG 7975 ||||| || ||||| || || ||||||||| ||||||||||||||| Sbjct 17172 TCAGGGCGGCAATAAGCGGCCGGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACG 17227 Score = 141 bits (156), Expect = 9e-29 Identities = 468/717 (65%), Gaps = 27/717 (4%) Strand=Plus/Plus Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 || || ||||||| || || || || | ||||||||||||||||| ||||| ||| Sbjct 17485 GCGATCATCGAATCCCAGGTGGAGACGGGCGTACCGTACATGCTGTACAAGGACGCGTGC 17544 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 || ||||||||| || ||| | |||||||| ||| || || ||| | || Sbjct 17545 AATCGCAAAAGCAACCAGCAAAACATCGGCACCATCAAGTGCTCTAACCTTTGCACCGAG 17604 Query 8353 ATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTA 8412 ||||| ||||| || ||||||||||| || ||||| || || ||| | || Sbjct 17605 ATTGTGGAGTACTCGTCGAAGGACGAAGTGGCGGTGTGCAACCTGGCCTCGATTGCGTTG 17664 Query 8413 AACGCGTTCGTTGAT--CGACGCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCG 8470 ||| |||||| | |||| | || || || || | | ||||| | | | Sbjct 17665 AACATGTTCGTCCAGTCCGACCGT-----ACGTATGATTTCGCGAAGCTGAAAGAGGTAG 17719 Query 8471 TGCAA---GTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGG 8527 || |||||| ||||| || | || || || || || || || || || Sbjct 17720 CCAAAATCGTGACG---CGCAACTTGAACAAGATTATCGACGTGAACTTCTACCCGGTGC 17776 Query 8528 AAGAAGCGC-GCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTG 8586 |||||| ||| ||||||||||||||| | || | || | ||||| || ||| || Sbjct 17777 CGGAAGCGAAGCGC-TCGAACATGCGCCACCGTCCGATCGGTATCGGCGTCCAGGGTATG 17835 Query 8587 GCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAAC 8646 || || ||||| | || || || |||| ||||| || || |||| | |||||| Sbjct 17836 GCTGATGCGTTCATCTTGATGGGCTTCCCGTACGAGAGTGCGGAGGCGCAGAAGCTCAAT 17895 Query 8647 ATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGC--CC 8704 | ||| || || | || ||||| || | ||||| ||||| | | || || Sbjct 17896 CAGCAGATATTTGAGACCATCTACTACGGTGCGCTGGAAGCTAGCTGCGAGATGGCCGCC 17955 Query 8705 GAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAAT 8764 || | ||| ||||||| |||||| ||| || | ||| || || |||| | Sbjct 17956 CAGGA--GGGACCGTACGAGACGTACGAGGGGTCTCCGGTGAGCAAGGGCATTCTGCAGT 18013 Query 8765 ACGACATGTGGAATGTCACG---CCCACCTCTTTGTGGAATTGGAGCGA-TTTGAAACGC 8820 ||||||||||||| || | || || ||||||||||| |||| |||| Sbjct 18014 ACGACATGTGGAA---CAAGGTACCGACGGACCTGTGGAATTGG-GCGACGCTGAAGGAA 18069 Query 8821 AAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACG 8880 || ||||| || |||| ||||||| || ||| || | || ||||| || || || Sbjct 18070 AAGATTGCCAAACACGGTGTGCGCAACTCACTGCTGCTCGCGCCGATGCCGACGGCTTCG 18129 Query 8881 ACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 || || ||||| |||| |||||||| || || ||||||| || |||||| ||| Sbjct 18130 ACGGCACAAATTTTGGGCAACAACGAGTCGTTCGAGCCGTATACGTCCAACGTTTAC 18186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505181299799800