Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2173 188 1e-42 >seq2173 Length=41539 Score = 188 bits (208), Expect = 1e-42 Identities = 936/1480 (63%), Gaps = 19/1480 (1%) Strand=Plus/Minus Query 68761 GTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATA 68820 ||||| || || | || || || || |||| |||||| || || || || || ||||| Sbjct 18173 GTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATC 18114 Query 68821 GGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTC 68880 || || | || | || | | ||| ||| | || || || || || | Sbjct 18113 GGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCC 18054 Query 68881 CAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTT 68940 |||| ||| || || | ||||| ||||| | ||||| || ||||| || || || Sbjct 18053 CAATTCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTC 17994 Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000 | || || | || || || || ||||| ||||| | || | || || || || Sbjct 17993 ACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCT 17934 Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060 || | |||||||| || || || || || |||| || |||||| | || || || | Sbjct 17933 TCCAGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCA 17874 Query 69061 CTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCG 69120 || ||| | || | | | || || ||||| |||| ||||| || || |||||| Sbjct 17873 CTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCG 17814 Query 69121 ATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCT 69180 || || | || | | | || || | | ||||| || | || || | || | || Sbjct 17813 ATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCG 17754 Query 69181 ATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA 69240 ||||| || || | || || || | ||| | || || || || || |||||| Sbjct 17753 ATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCA 17694 Query 69241 AATC----GTCCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGC 69296 | ||| || | | ||||| |||| || | || || || || || || || Sbjct 17693 TACGTACGGTCGGACTGGA-CGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGC 17635 Query 69297 TACCTCAT---TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGAT 69353 || || | | || | || | | ||||| || || || ||| || ||||| Sbjct 17634 CACTTCGTCCTTCGAC---GAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGAT 17578 Query 69354 AGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGG 69413 || || | |||||||| || || || || || ||||||||||| || || |||| Sbjct 17577 GGTGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACGG 17518 Query 69414 AGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTA-GCATTTA--T 69470 || || || | ||| |||||||| || | ||| | || ||| || |||| | Sbjct 17517 TACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACA-GATCCTGCGCCTTTACCT 17459 Query 69471 TACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCC 69530 ||| || | || ||| || ||||| || || | | ||||| || || || Sbjct 17458 GGCGGA--TGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCC 17401 Query 69531 CCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATC 69590 ||| ||| ||||||| ||||| || | || |||||||| |||| || | | Sbjct 17400 CCACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGC 17341 Query 69591 CTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCT 69650 || || || | ||| || ||||| |||||||| || || || | || | | | Sbjct 17340 CTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCG 17281 Query 69651 ATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCA 69710 || || || || || ||||| || ||||| | |||||| | | ||| ||||| Sbjct 17280 CACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCA 17221 Query 69711 TGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCT 69770 || || || || || || | | ||||| || ||||| || |||||||| | ||| | Sbjct 17220 CGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCG 17161 Query 69771 GGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCC 69830 || ||||| || || || | ||||||||| | | || || || | || || || || Sbjct 17160 TGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCC 17101 Query 69831 AGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCA 69889 || || || |||| | || || || | | | | || || || || || || Sbjct 17100 GGAGATGTACGTTCCCTTCGCCCGGATGC-AGTGCACGTTCAGCCCGATGCCACCGGCAG 17042 Query 69890 TTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTA 69949 || ||||| || || || | |||| ||||| || || || || ||||| || || Sbjct 17041 ACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGG 16982 Query 69950 TCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATG 70009 |||| | || ||||| || |||| || || | || |||| || | | Sbjct 16981 ACATGGTCAGCAGAAAGCAAGACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATGG 16922 Query 70010 TAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATT 70069 | || || || || || || | || || |||||||| || || || || || | | Sbjct 16921 TCGGCGAGGCATGGGTAAAGTAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCT 16862 Query 70070 CTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTA 70129 | || ||| ||| || || || ||||| ||||||| ||||||||| || | || | Sbjct 16861 CGATGTCCGTGCCATGGATGCCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGA 16802 Query 70130 CCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGT 70189 | | || || || ||||||| || || ||||| ||||| || || ||||||| Sbjct 16801 CAATCTTGCCCTTGATCTTCAACAAATACGAACGCTCCAGGGTTTTGAAGCCGAAATAGT 16742 Query 70190 TGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 |||| ||||| | |||||||||||| | |||||||| Sbjct 16741 TGTACCCGAAGTCACGATCGTAAATAATAGCCGAATTTAG 16702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686613729738600