Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2830 102 6e-17 >seq2830 Length=91389 Score = 102 bits (112), Expect = 6e-17 Identities = 270/407 (66%), Gaps = 14/407 (3%) Strand=Plus/Minus Query 19542 AAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC 19601 |||| |||||| ||||| ||| | |||||| | || ||||| || || | || | Sbjct 9965 AAGTGGTTTGCATATTATTATATTTGATGAAATCGATGCAATTTGCAAAGCTCGTGGCAC 9906 Query 19602 ---TGGTGTAAAT---GGAGTACATGACACTGTTGTCAATCAACTCCT-GTCAAAATTAG 19654 ||||| ||| || || ||||| ||||||||||| ||||| | | ||||||| | Sbjct 9905 CGTTGGTGGCAATTCAGGGGTTCATGATACTGTTGTCAACCAACTGTTAGCCAAAATT-G 9847 Query 19655 ACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAA 19714 | |||||| | || |||| || ||||| || || || ||||| ||| | ||| | | Sbjct 9846 ATGGTGTTGAGCAGTTGAACAACATTTTGGTAATCGGAATGACAAATCGCAGGGACATGA 9787 Query 19715 TAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCG 19774 ||||| ||| | |||| |||||||| ||||| | | || || || | | | || Sbjct 9786 TAGACGAAGCCCTGCTACGTCCCGGTCGTCTGGAAGTTCAAATGGAGATCAGCCTGCCGA 9727 Query 19775 ATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAA---AATA 19831 | ||| || || ||| | ||||| ||||| ||||| | |||| | || || | Sbjct 9726 ACGAAGAGGGTCGCGTGCAGATTTTGAACATCCATACCAGACGCATGAAAGAATTCAAAA 9667 Query 19832 ACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCG 19891 | | || ||||||||| || ||| ||| | || ||||| || |||| Sbjct 9666 AAC---TAGCCCCAGATGTAGATTTACGTGAACTTGGTGTTATGACGAAAAATTACAGCG 9610 Query 19892 GCGCAGAACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 | || || | || || || ||| | || || ||||| | ||||||| Sbjct 9609 GTGCGGAGTTAGAAGGTTTGGTGCGCGCAGCACAATCGACTGCAATG 9563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397289536111825