Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq5475 86.0 6e-12 >seq5475 Length=120610 Score = 86.0 bits (94), Expect = 6e-12 Identities = 204/307 (66%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 31249 AGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATAT 31308 |||| || || || |||||||||||||||||||| |||| |||||| |||||||| || Sbjct 29930 AGCGAGTAGCTTGCGATGTTGAATGGTACACCCAAACCCACATCGGCCGATCGTTGGTAC 29989 Query 31309 AACAAACAGGAAAGTTCATCTCCGGT---CACGTAAAATTGAAATAACACATGACAAGGC 31365 | || || |||||| ||| | ||| ||||||| || ||| ||||| Sbjct 29990 ATTTGGCATGATAGTTCA---CCGTTATCAACGAAAAATTGTGCCAAGCAATGGCAAGGT 30046 Query 31366 GGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTG 31425 || | |||||| | | | ||| |||||||| ||||| | | | || ||| | Sbjct 30047 GGTAGAGCCATATTCGGGATGTCGGACGGATTCCAGGCGCTCATGATGATTCGGCGATCG 30106 Query 31426 GTTGGATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTA 31485 |||| | |||||| | | || || ||| | || || || |||| || || Sbjct 30107 TACGGATTATTCTTAATTTTGTAGATTACTTCTGCAAGCTGGTCTATCCCTTGTCCAGTG 30166 Query 31486 TAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATA 31545 |||| | || || ||||| | ||| || || || ||||||||||| || || | Sbjct 30167 TAATCATCATGGCAAGTTTTGTACGTTGCGCCAAAGTGGCGCCATTGAAAACCGTACACT 30226 Query 31546 GGTCCCA 31552 ||||||| Sbjct 30227 GGTCCCA 30233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512797226877200