Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 221 1e-52
>seq2173
Length=41539
Score = 221 bits (244), Expect = 1e-52
Identities = 1055/1648 (64%), Gaps = 49/1648 (3%)
Strand=Plus/Minus
Query 130406 TTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCCT 130465
|| ||||| ||||| || || ||||| ||| ||||| ||||||||||| ||||||||
Sbjct 18572 TTGTCGACCGTGAACTGGATCGCATTTACGGCGGGCTTCGTGCGCAAATAGTACATGCCA 18513
Query 130466 GTTTTGAGTCCAATTTTGTGTCCATAATTGTGGA--TGCTGC-ACATT-GTTTG--GTAA 130519
|| || || || || || ||| ||||| ||| | || | | ||| |||
Sbjct 18512 GTCTTCAGGCCCATCTT----CCACGC--GTGGAAGTGCATCGACGTCAGCTTGCCGTAG 18459
Query 130520 TTGGGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCT 130579
|| |||| ||||||| ||||||| ||| ||||| || || || || || |||| |||
Sbjct 18458 TTCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGATGAACGCACCCCGGTCG 18399
Query 130580 GCAGCCATGTCGA-GCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGATCCCT 130638
|| ||||| | || ||| | ||| | ||||||||| | || ||||| ||||| |
Sbjct 18398 GCTGCCATCTGGATGCACGTTTTCACCGAA-ATCTCCCAAACCGTTTTGTACAGATCGCG 18340
Query 130639 AATGTGTTTGGGTATGCGCGCAATCGATTGAACGCTACCGTTGTTGGCTATAATTTCGTT 130698
| | || ||||| || | || || | ||||||| ||| | ||| |||
Sbjct 18339 CACTTCCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGTGGGCCAGGATTGTGTT 18280
Query 130699 GCGCATACTTTTATCGT---ACAATCCAAGC-TGTACAAGATCTTTTACCAAATGATTAT 130754
|||| | ||||| ||| || || || || |||| || | || || | |
Sbjct 18279 CTTCATA---TCATCGTCCCACAGACCGTGCGTGGTCA-GATCCTTGATCAGGTGGTGGT 18224
Query 130755 TAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTT 130814
| | | ||||| || || | ||| ||||| | ||||| |||| ||| |||| |
Sbjct 18223 TCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCT 18164
Query 130815 CAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTA 130874
| || || ||||||||||| || |||||||| || | || || ||||| || | |
Sbjct 18163 CGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCA 18104
Query 130875 ATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATA 130934
|| || || || | |||||| | | || ||| ||||| |||||| ||| |
Sbjct 18103 GCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACA 18044
Query 130935 GAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGAC 130994
| || ||| || ||||||||||| || | || || ||||| || || | |||
Sbjct 18043 GGTCCGTCGGT---ACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAG 17987
Query 130995 TGGATTCGAACGATTCGTA-GATTCCTTCGACACGAGCCAGGTCGTTGCTAGCTTCCAAA 131053
||| ||| ||||| | | ||| | || |||| ||| |||||||||||
Sbjct 17986 ACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCG-GCCATCTCGCAGCTAGCTTCCAGC 17928
Query 131054 GCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTTAATTGTTTCGCTTGGTTGCTCTCG 131113
|| ||||| || ||||| || || || | ||| | | | ||| | ||||||
Sbjct 17927 GCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCG 17868
Query 131114 TAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGACCCTGTATCCCAACGCCCACCGGT 131173
|| || || ||| || || || || || || | |||||| | || | || | |||
Sbjct 17867 TACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGA 17808
Query 131174 CTATGTTTTAAATTACATTTACGCGAACATTCGG--TGGGATAAAGGTTAATGTCAATTA 131231
| || | || | || | | ||| || || | ||| | ||| || |
Sbjct 17807 CGGTGGCGCATGTTCGAGCGCTTCG--CTTCCGGCACCGGGTAGAAGTTCACGTCGATAA 17750
Query 131232 TTTTGTTTAAATTGCGCACTACAATTTGTGTGACGCTTTTCAATTTGTCGAAATCAAACG 131291
| ||||| || |||||| || |||| | || ||||| || |||||||| |||
Sbjct 17749 TCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACG 17690
Query 131292 TGCCAGTTTCGAGGTTTAC-AAATTGATTTACACATATTGACGCCAGATTACAAACTGCC 131350
| | ||| | || || || | || || || || ||||| || || || |||
Sbjct 17689 T---ACGGTCGGACTGGACGAACATGTTCAACGCA-ATCGAGGCCAGGTTGCACACCGCC 17634
Query 131351 GTTTCGTCATAATCG--CAATACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGG 131408
|||||| | ||| | |||| ||||| |||| ||| | ||| || ||| ||||
Sbjct 17633 ACTTCGTCCT--TCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGG 17576
Query 131409 TGCCCAAATTTTGTTGATTGCTTTTAGCATT-CACATGGTCCTTGTACATCATGTAGGGC 131467
|||| | ||||| || |||||||| ||| ||| ||||||||||| |||||| ||
Sbjct 17575 TGCCGATGTTTTGCTGGTTGCTTTTGCGATTGCAC-GCGTCCTTGTACAGCATGTACGGT 17517
Query 131468 GTGCCCGTTTCGACTTGAGTTTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATT 131525
|||||| || || || | ||| || | | | || | || | | || | |
Sbjct 17516 ACGCCCGTCTCCACCTGGGATTCGATGA--TCGCAAACCACAGATCCTGCGCCTTTACCT 17459
Query 131526 GATATTTGTATTGGCCGCGTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAA 131585
| || | |||| || || || ||||||| | || || | || |||
Sbjct 17458 GGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCC 17399
Query 131586 ACGAACTGTCCAAATTGGGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTT 131645
||||| | |||| |||||| ||| || ||||| | |||| ||||| |
Sbjct 17398 ACGAATCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCT 17339
Query 131646 CAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTT 131705
| || |||| ||| |||| |||||| | ||| | |||||| |||| || | ||
Sbjct 17338 CCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCA 17279
Query 131706 TCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGG 131765
||| || | || | |||| |||| || ||||| || || | || | ||||| |
Sbjct 17278 CCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACG 17219
Query 131766 GTTCCAAATACACTGCCATTGCGCCTTTGCGCTTA---CCGCCTTGATTAACATGACGAA 131822
| |||| || | || | || || |||||| ||||| |||| || | ||
Sbjct 17218 GCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTG 17159
Query 131823 CCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCT 131882
|| |||||||||| ||||||| ||| ||| |||| ||||| | |||| || ||||
Sbjct 17158 CCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCGG 17099
Query 131883 TAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATT 131942
||||| | || || || | ||| ||| ||||| || || || || ||| | | |
Sbjct 17098 AGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTTCAGCCCGATGCCACCGGCAGACT 17039
Query 131943 TAGAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAA 132002
| ||||| |||||||| | | || |||| ||||| ||||| | |||||| ||| |
Sbjct 17038 TGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGACA 16979
Query 132003 TGTCGACTAAAAAGCAAGAGGACAACTG 132030
|| | | ||||||||| |||| |||
Sbjct 16978 TGGTCAGCAGAAAGCAAGACGACAGCTG 16951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424756427513880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |