Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2173 138 4e-27 >seq2173 Length=41539 Score = 138 bits (152), Expect = 4e-27 Identities = 358/534 (67%), Gaps = 14/534 (3%) Strand=Plus/Plus Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040 || ||| | || |||| ||||||| ||| || ||||||||||| || ||| || || Sbjct 17131 CCGATGCTGCGCGTGTACAACAACACGGCACGGTACGTCGATCAGGGCGGCAATAAGCGG 17190 Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGAACGGTTTTTA 255097 || || ||||| |||||||||||||||||||||||| ||| |||| |||||| Sbjct 17191 CCGGGTGCGTTTGCCATCTACCTGGAGCCGTGGCACGGCGATGTGTTTGA---GTTTTTG 17247 Query 255098 CTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTC 255157 ||| | || ||||||| |||||| || ||| || ||||| | | ||| || Sbjct 17248 GATCTGAAGAAAAACACCGGCAAGGAGGAGGTGCGCGCACGGGACATGTTCTACGCGCTC 17307 Query 255158 TGG-TGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCCTCATGT 255215 ||| | | | |||||||| |||| |||||||| ||| |||| || ||||| | |||| Sbjct 17308 TGGATTCCG-GATCTGTTCATGCAGCGCGTGGAGGCGA-ACGAAACGTGGAGTTTGATGT 17365 Query 255216 GTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAACTGTATC 255275 | || || | ||||| | | ||| || ||||| || ||||| || || |||| Sbjct 17366 GCCCGCACGACTGTCCCGGATTGGCCGATTCGTGGGGCGAAGAGTTCGAGAAGTTGTACA 17425 Query 255276 TGGAGTACGAGCGTGCCGGCCGGTTCGTACGCCAAGTGCCCGCGAAGAAGATCTGGAACA 255335 || || ||| | ||||| ||| | ||||| || ||| || | | ||| Sbjct 17426 CGGGCTATGAGAAGGAGGGCCGCTTCATCCGCCAGGTAAAGGCGCAGGATCTGTGGTTTG 17485 Query 255336 CGATGGTGCGCAT-GCAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAGAC-CACAT 255393 |||| | || || ||| |||| || || | |||| | | || |||| ||| | Sbjct 17486 CGATCAT-CGAATCCCAGGTGGAGACGGGCGTACCGTACATGCTGTACAAGGACGCGTGC 17544 Query 255394 AAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTGTGCACCGA 255453 || |||| | ||||| | || ||| || || |||| ||||| |||||||| Sbjct 17545 AATCGCAAAAGC-AACCAGCAAAACATCGGCACCATCAAGTGCTCTAACCTTTGCACCGA 17603 Query 255454 GATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTCCAT 255507 |||| | | || |||| | | || ||||| || |||||| |||| || || Sbjct 17604 GATTGTGGAGTACTCGTCGAAGGACGAAGTGGCGGTGTGCAACCTGGCCTCGAT 17657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587636653177425