Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq27055 100 3e-16 >seq27055 Length=447146 Score = 100 bits (110), Expect = 3e-16 Identities = 193/279 (69%), Gaps = 12/279 (4%) Strand=Plus/Minus Query 168431 GTAAAGATATACCTCGTTTGA--GACGC-ATCCTTACCACCCATGAGACGCGTACCAAAC 168487 || ||||| ||||||| || | ||| |||||| ||||| | | |||||||| ||| Sbjct 54173 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 54117 Query 168488 TGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTG 168547 ||||| | ||| || |||||||| ||||| ||| | ||||| | ||||| || Sbjct 54116 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 54057 Query 168548 ACAATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACA 168604 || ||||| || | | || |||| || ||||||||||| || | | || || || Sbjct 54056 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 54000 Query 168605 AATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTAC 168664 | |||||| ||||||||| |||| ||| |||| ||| | |||||||| | || Sbjct 53999 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 53940 Query 168665 ATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATG 168703 | ||||| || || ||||| || || ||| |||| Sbjct 53939 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATG 53901 Score = 100 bits (110), Expect = 3e-16 Identities = 193/279 (69%), Gaps = 12/279 (4%) Strand=Plus/Plus Query 168431 GTAAAGATATACCTCGTTTGA--GACGC-ATCCTTACCACCCATGAGACGCGTACCAAAC 168487 || ||||| ||||||| || | ||| |||||| ||||| | | |||||||| ||| Sbjct 65608 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 65664 Query 168488 TGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTG 168547 ||||| | ||| || |||||||| ||||| ||| | ||||| | ||||| || Sbjct 65665 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 65724 Query 168548 ACAATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACA 168604 || ||||| || | | || |||| || ||||||||||| || | | || || || Sbjct 65725 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 65781 Query 168605 AATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTAC 168664 | |||||| ||||||||| |||| ||| |||| ||| | |||||||| | || Sbjct 65782 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 65841 Query 168665 ATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATG 168703 | ||||| || || ||||| || || ||| |||| Sbjct 65842 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATG 65880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583010253032600