Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq27055 100 3e-16
>seq27055
Length=447146
Score = 100 bits (110), Expect = 3e-16
Identities = 193/279 (69%), Gaps = 12/279 (4%)
Strand=Plus/Minus
Query 168431 GTAAAGATATACCTCGTTTGA--GACGC-ATCCTTACCACCCATGAGACGCGTACCAAAC 168487
|| ||||| ||||||| || | ||| |||||| ||||| | | |||||||| |||
Sbjct 54173 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 54117
Query 168488 TGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTG 168547
||||| | ||| || |||||||| ||||| ||| | ||||| | ||||| ||
Sbjct 54116 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 54057
Query 168548 ACAATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACA 168604
|| ||||| || | | || |||| || ||||||||||| || | | || || ||
Sbjct 54056 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 54000
Query 168605 AATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTAC 168664
| |||||| ||||||||| |||| ||| |||| ||| | |||||||| | ||
Sbjct 53999 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 53940
Query 168665 ATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATG 168703
| ||||| || || ||||| || || ||| ||||
Sbjct 53939 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATG 53901
Score = 100 bits (110), Expect = 3e-16
Identities = 193/279 (69%), Gaps = 12/279 (4%)
Strand=Plus/Plus
Query 168431 GTAAAGATATACCTCGTTTGA--GACGC-ATCCTTACCACCCATGAGACGCGTACCAAAC 168487
|| ||||| ||||||| || | ||| |||||| ||||| | | |||||||| |||
Sbjct 65608 GTGAAGATGTACCTCG---GACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAAC 65664
Query 168488 TGACCACACGGCTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTG 168547
||||| | ||| || |||||||| ||||| ||| | ||||| | ||||| ||
Sbjct 65665 TGACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTC 65724
Query 168548 ACAATCGTGTCCGCG-AGAGAGACT--TCACCGTGGTGGTACGCACTCTTCTCTGCGACA 168604
|| ||||| || | | || |||| || ||||||||||| || | | || || ||
Sbjct 65725 ACGATCGT---CGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACC 65781
Query 168605 AATGCCGCCAACTGCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAGCATGCGTAC 168664
| |||||| ||||||||| |||| ||| |||| ||| | |||||||| | ||
Sbjct 65782 GAACCCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCATTACGCTTGAAGCATGTGAAC 65841
Query 168665 ATAACCTTGCGTTGCGAAGGCTTGAGACCATCCGCCATG 168703
| ||||| || || ||||| || || ||| ||||
Sbjct 65842 AACACCTTCCGCTGGCCCGGCTTCAGGCCGTCCAGCATG 65880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583010253032600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |