Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq12585 107 6e-18 >seq12585 Length=436458 Score = 107 bits (118), Expect = 6e-18 Identities = 319/489 (65%), Gaps = 5/489 (1%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| ||||| || || || || || |||| ||||| || || || || | Sbjct 405863 GTGGAAATCATTGCCAACGACCAGGGAAATCGAACGACGCCGAGCTATGTCGCGTTCTCG 405804 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| |||||||||| | || || || || | || || || | ||| Sbjct 405803 GACACGGAGCGTTTGATTGGTGACGCGGCCAAGAACCAGGTGGCCATGAACCCGACAAAC 405744 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATC 349437 || || || ||||| ||||| || || || | |||| | | ||| | || | Sbjct 405743 ACAGTGTTCGATGCCAAGCGGCTAATCGGACGCAAGTATGAC-GACCCCAAGATTCAGGC 405685 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 ||||| || || | || || || || | | || ||| | | || || | ||| | Sbjct 405684 CGATCTGAAGCACTGGCCGTTCACAGTAG---CGAACGACTGCGGCAAGCCGAAGATTCA 405628 Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 ||| || | ||||| |||| || ||| | ||| ||||| || || ||||| | Sbjct 405627 GGTCGAGTTCAAAGGAGAACGCAAGACATTCTCACCAGAAGAGATCAGTTCGATGGTGCT 405568 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 ||||||||||||| || ||||||||| | ||| | | || | | || || || Sbjct 405567 GACGAAAATGAAGGAAACGGCGGAAGCATATCTGGGTCAGTCCGTGAAGAACGCGGTCAT 405508 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || ||||| || || || || |||||| || ||||| ||||| ||| ||| Sbjct 405507 CACAGTTCCAGCTTACTTCAACGACAGCCAGCGACAGGCTACAAAGGATGCCGGCGCCAT 405448 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||||| | ||||| | |||| || || ||||| || ||||| || | || || || Sbjct 405447 CGCGGGTCTGAATGTGATGCGAATCATCAACGAACCGACAGCTGCCGCGTTGGCTTACGG 405388 Query 349738 GCTTGATAA 349746 || || || Sbjct 405387 TCTGGACAA 405379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514587231120095