Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 196 5e-45
seq27055 129 7e-25
>seq2173
Length=41539
Score = 196 bits (216), Expect = 5e-45
Identities = 1004/1570 (64%), Gaps = 56/1570 (4%)
Strand=Plus/Minus
Query 80037 CGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGA 80096
||| |||| |||||||||||| ||||| |||||| ||||||| ||| | |||||| ||
Sbjct 18534 CGTGCGCAAATAGTACATGCCAGTCTTCAGGCCCATCTTCCACGCGTGGAAGTGCATCGA 18475
Query 80097 ACTGAGCTTCGCA-AGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGA 80155
| ||||| | ||| | || | | ||| | |||||| | ||||| ||||| ||
Sbjct 18474 CGTCAGCTTGCCGTAGT-TCGGTTCCGCCACGTGGATGTTGAACGACTGCGACTGGTCGA 18416
Query 80156 TGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTG 80215
|||| || || || || || ||||| | || | || | ||| ||||| || |
Sbjct 18415 TGAACGCACCCCGGTCGGCTGCCATCTGGATGCACGTTTTCACCGAAATCTCCCAAACCG 18356
Query 80216 TACGATACACCTTACGAAGCTCCTCTGGAATGTCCA-GATTTT--GCACACTGCCACCGT 80272
| |||| | || | |||| || || | | ||| || | | ||| ||
Sbjct 18355 TTTTGTACAGATCGCGCACTTCCTTCGGTATTTGCTCGATGTTCTGGATCGAGCCGTTGT 18296
Query 80273 CCTTTACAATTTGATTTTTCAATTCAGACGTCC-AGACACCAAGCTTGTGCAGATCTTTC 80331
| ||| || |||| ||| ||||| | | ||| || || |||||| ||
Sbjct 18295 GGGCCAGGATTGTGTTCTTCATATCAT-CGTCCCACAGACCGTGCGTGGTCAGATCCTTG 18237
Query 80332 ACAAGGTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTT 80391
| ||||| | ||| | || |||||| |||| || ||| || || | |||
Sbjct 18236 ATCAGGTGGTGGTTCACCACCTGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTG 18177
Query 80392 GTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGC 80451
| || || ||||| || | ||||||||| || | || || ||||| |||||||||
Sbjct 18176 GACGTATACGGCTCGAACGACTCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGC 18117
Query 80452 ATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCT 80511
||||| ||| || |||||| || |||| ||||| || || | || ||
Sbjct 18116 ATCGGCGCGAGCAGCAGTGAGTTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTC 18057
Query 80512 GACCAAAAATCAACCCCAACGCTGTGACC-----CCACATGTCGTGCTGCAAGATGCCCT 80566
| |||| || || || | ||| ||||||||||| ||||| |||||||
Sbjct 18056 GCCCAAT--TCCACAGGTCCGTCGGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCT 17999
Query 80567 CCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACA-C 80625
| ||||||||||| || ||||||||||||| |||||| ||||| ||| || |
Sbjct 17998 TGCTCACCGGAGACCCCTCGTACGTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGC 17939
Query 80626 GA-CTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGC 80684
| || | || || ||| || ||| |||||| | || || | ||||
Sbjct 17938 TAGCTTCC--AGCGCACCGTAGTAGATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGC 17881
Query 80685 CTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCC 80744
|| | ||| ||| |||||||||| |||||| | ||||||| ||||| |||||
Sbjct 17880 CTCCGCACTCTCGTACGGGAAGCCCATCAAGATGAACGCATCAGCCATACCCTGGACGCC 17821
Query 80745 GATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTT 80804
||| ||||||| ||||||||| ||||||| |||| || ||||| | ||||| |||||
Sbjct 17820 GATACCGATCGGACGGTGGCGCATGTTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTT 17761
Query 80805 ATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTG 80864
||||| | ||||| |||||| || || | | || || | || |||
Sbjct 17760 CACGTCGATAATCTTGTTCAAGTTGCGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGC 17701
Query 80865 AAAGTCGAATT---GGTTCCCCTTCACAAA--TGCCGGAAGGCTCAGGGACGCCAGATTG 80919
|| || | ||| || || || || || || | || ||||| |||
Sbjct 17700 GAAATCATACGTACGGTCGGACTGGACGAACATGTTC-AACGCA-ATCGAGGCCAGGTTG 17643
Query 80920 CACACGGCCACCTCTTCAGCATCTGTAA--ACTCGACGATTTCCGTGCACAAATTAGAAG 80977
||||| ||||| || || | || | |||| || || || ||||| | |||||
Sbjct 17642 CACACCGCCACTTCGTC--CTTCGACGAGTACTCCACAATCTCGGTGCAAAGGTTAGAGC 17585
Query 80978 ACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG-TTGCAAGCGTCCTTGTAGCAC 81036
|||| || || || | ||||| |||||| | || ||| ||||| ||||||||||| |
Sbjct 17584 ACTTGATGGTGCCGATGTTTTGCTGGTT-GCTTTTGCGATTGCACGCGTCCTTGTACAGC 17526
Query 81037 ATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCC 81096
|||||||| || ||||| ||||| || | || ||| || ||| | || |||||
Sbjct 17525 ATGTACGGTACGCCCGTCTCCACCTGGGATTCGATGATCGCAAACCACAGATCCTGCGCC 17466
Query 81097 TTGACCACCTTGCG---GAATTTGCCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAA 81152
|| |||| ||| ||| ||| || | |||| | ||| | |||| |||||
Sbjct 17465 TT---TACCTGGCGGATGAAGCGGCCCTCCTTCTCATAGCCCGTGTACAACTTC-TCGAA 17410
Query 81153 --CTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAG 81210
||| || || ||| || | | | || || |||| |||||||||| |||
Sbjct 17409 CTCTTCGCCCCACGAA--TCGGCCAATCCGGGACAGTCGTGCGGGCACATCAAACTCCA- 17353
Query 81211 TCGGTGTCGTT---CTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAAC 81267
|| ||||| ||| || || |||||| || || |||||||| ||| ||||
Sbjct 17352 --CGTTTCGTTCGCCTCCACGCGCTGCATGAACAGATCCGGAATCCAGAGCGCGTAGAAC 17295
Query 81268 AGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATG 81327
| ||| || |||| ||||||| | || ||| || || | ||| || |
Sbjct 17294 ATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTTTTTCTTCAGATCCAAAAACTCAAAC 17235
Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG---ACGGCCACCC 81384
| || | ||||| |||||||| || | ||| | || ||| || | ||| |||
Sbjct 17234 ACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAACGCACCCGGCCGCTTATTGCCGCCC 17175
Query 81385 TGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGAC 81444
|| | |||||| || || || ||| | || |||| ||| || | | || | ||
Sbjct 17174 TGATCGACGTACCGTGCCGTGTTGTTGTACACGCGCAGCATCGGCACCAACCCGTTCGAA 17115
Query 81445 TGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAAGAC 81502
|||||||| || ||| || ||||| || || | | ||| || || |
Sbjct 17114 ATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGCCCGGATGCAGTGCACGTT--CAGCC 17057
Query 81503 CGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCT 81562
|||||||||| | |||| || ||| | || ||| | |||| || || || || || |
Sbjct 17056 CGATGCCACCGGCAGACTTGGAGATCAGTGCGCACTGCTTCAGCGTGTCGTAGATGCCTT 16997
Query 81563 CGATGCTATC 81572
||||||| ||
Sbjct 16996 CGATGCTGTC 16987
>seq27055
Length=447146
Score = 129 bits (142), Expect = 7e-25
Identities = 299/447 (67%), Gaps = 8/447 (2%)
Strand=Plus/Plus
Query 31962 GCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGC 32021
|||||| || || | || ||||||||| ||||| ||||| |||||| | | | |
Sbjct 53886 GCGGTCGATCCCGTCCATGCTGGACGGCCTGAAGCCGGGCCAGCGGAAGGTGTTGTTCAC 53945
Query 32022 CTGCCTCAAGAAGAACCTGTCGAGTGACA--TGAAGGTGGCGCAGCTGTCGGGCTACGTG 32079
||| ||||| || || | || || | ||||||||||||||||| |||| | |||
Sbjct 53946 ATGCTTCAAGCGTAA--TGACAAGCGAGAGGTGAAGGTGGCGCAGCTGGCGGGTTCGGTG 54003
Query 32080 GCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTT 32139
|| || | ||||| ||||||||||| ||| || || || || |||||
Sbjct 54004 GCGGAAATGTCCGCCTACCACCACGGCGAACAGTCACTTTGCTCGACGATCGTGAACCTG 54063
Query 32140 GCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGG 32199
|| ||||||| |||||| || ||| | || | || || || ||||| ||
Sbjct 54064 GCGCAGAACTACGTCGGTAGCAACAACATCAATCTGCTGTTTCCGGGAGGTCAGTTCGGT 54123
Query 32200 ACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCG 32257
|| ||| | |||||||||||||| || || | | ||||||||||| | |||
Sbjct 54124 ACGCGGTTGACCGGTGGCAAGGATAGCGCCAGTCCGAGGTACATCTTCACGATGATGTCG 54183
Query 32258 CACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTG 32317
|| |||||| || ||| | ||| ||||||| || |||| |||| | | |
Sbjct 54184 ACACT--GACGCGGTGCATCTTCCATCCGCTGGACGATCCGCTGCTGGAGTATCAGTACG 54241
Query 32318 ATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGA 32377
| ||| |||||| |||||||||| | || ||| | | |||||| | || | |
Sbjct 54242 AGGACAACCAGCGGATCGAGCCGGTTTGGTATCTGCCGATCGTGCCGATGCTGCTGATCA 54301
Query 32378 ACGGTGCAGAAGGCATCGGAACGGGGT 32404
||||||| || || ||||| |||||||
Sbjct 54302 ACGGTGCGGACGGTATCGGTACGGGGT 54328
Score = 129 bits (142), Expect = 7e-25
Identities = 299/447 (67%), Gaps = 8/447 (2%)
Strand=Plus/Minus
Query 31962 GCGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGC 32021
|||||| || || | || ||||||||| ||||| ||||| |||||| | | | |
Sbjct 65895 GCGGTCGATCCCGTCCATGCTGGACGGCCTGAAGCCGGGCCAGCGGAAGGTGTTGTTCAC 65836
Query 32022 CTGCCTCAAGAAGAACCTGTCGAGTGACA--TGAAGGTGGCGCAGCTGTCGGGCTACGTG 32079
||| ||||| || || | || || | ||||||||||||||||| |||| | |||
Sbjct 65835 ATGCTTCAAGCGTAA--TGACAAGCGAGAGGTGAAGGTGGCGCAGCTGGCGGGTTCGGTG 65778
Query 32080 GCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTT 32139
|| || | ||||| ||||||||||| ||| || || || || |||||
Sbjct 65777 GCGGAAATGTCCGCCTACCACCACGGCGAACAGTCACTTTGCTCGACGATCGTGAACCTG 65718
Query 32140 GCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGG 32199
|| ||||||| |||||| || ||| | || | || || || ||||| ||
Sbjct 65717 GCGCAGAACTACGTCGGTAGCAACAACATCAATCTGCTGTTTCCGGGAGGTCAGTTCGGT 65658
Query 32200 ACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCAC--CCGTCTCG 32257
|| ||| | |||||||||||||| || || | | ||||||||||| | |||
Sbjct 65657 ACGCGGTTGACCGGTGGCAAGGATAGCGCCAGTCCGAGGTACATCTTCACGATGATGTCG 65598
Query 32258 CACCTTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTG 32317
|| |||||| || ||| | ||| ||||||| || |||| |||| | | |
Sbjct 65597 ACACT--GACGCGGTGCATCTTCCATCCGCTGGACGATCCGCTGCTGGAGTATCAGTACG 65540
Query 32318 ATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGCTTCCGATGATCTTGGTGA 32377
| ||| |||||| |||||||||| | || ||| | | |||||| | || | |
Sbjct 65539 AGGACAACCAGCGGATCGAGCCGGTTTGGTATCTGCCGATCGTGCCGATGCTGCTGATCA 65480
Query 32378 ACGGTGCAGAAGGCATCGGAACGGGGT 32404
||||||| || || ||||| |||||||
Sbjct 65479 ACGGTGCGGACGGTATCGGTACGGGGT 65453
Score = 107 bits (118), Expect = 2e-18
Identities = 184/267 (69%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236
|| || || ||||| || | ||| ||||||||||| || ||||| ||| |||||
Sbjct 53032 GGATCGAAGAAGTCGAAGATCAAGGGCATTCCGAAGCTGGAGGACGCAAACGATGCCGGG 53091
Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296
| | ||| || | | | |||||||| || | |||||||| |||||||| || || |
Sbjct 53092 TCGCGCAACTCTCTCAACTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTG 53151
Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356
|| | | || || | || || |||||| | ||| ||| || |||||||| || ||
Sbjct 53152 GCCGTGTCGGGGCTGGGGGTGGTCGGGCGCGACACGTACGGTGTTTTTCCGCTGCGCGGT 53211
Query 31357 AAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCC 31416
|||| || ||||| || || || | || ||| | ||| || | ||| | |
Sbjct 53212 AAGCTGCTGAACGTGCGCGAAGCGACGCACAAGCAGATCCTGGAAAACGCGGAGATCAAC 53271
Query 31417 AACCTGAAAAAGATCCTCGGGCTTCAG 31443
||||||| |||||||||||||| |||
Sbjct 53272 AACCTGATCAAGATCCTCGGGCTGCAG 53298
Score = 107 bits (118), Expect = 2e-18
Identities = 184/267 (69%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 31177 GGGTCCAAAAAGTCTCGAATTACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGT 31236
|| || || ||||| || | ||| ||||||||||| || ||||| ||| |||||
Sbjct 66749 GGATCGAAGAAGTCGAAGATCAAGGGCATTCCGAAGCTGGAGGACGCAAACGATGCCGGG 66690
Query 31237 ACCCACAAGTCGCACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTT 31296
| | ||| || | | | |||||||| || | |||||||| |||||||| || || |
Sbjct 66689 TCGCGCAACTCTCTCAACTGCACGCTCATCCTGACCGAGGGAGACTCGGCCAAAACGTTG 66630
Query 31297 GCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGC 31356
|| | | || || | || || |||||| | ||| ||| || |||||||| || ||
Sbjct 66629 GCCGTGTCGGGGCTGGGGGTGGTCGGGCGCGACACGTACGGTGTTTTTCCGCTGCGCGGT 66570
Query 31357 AAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCC 31416
|||| || ||||| || || || | || ||| | ||| || | ||| | |
Sbjct 66569 AAGCTGCTGAACGTGCGCGAAGCGACGCACAAGCAGATCCTGGAAAACGCGGAGATCAAC 66510
Query 31417 AACCTGAAAAAGATCCTCGGGCTTCAG 31443
||||||| |||||||||||||| |||
Sbjct 66509 AACCTGATCAAGATCCTCGGGCTGCAG 66483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570065416038800
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