Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq17588 159 3e-34 >seq17588 Length=255762 Score = 159 bits (176), Expect = 3e-34 Identities = 206/282 (73%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 ||||| ||| ||||||| ||||| || | |||| | ||| || | ||| |||||| Sbjct 178131 ACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAAGATGCAC 178072 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || ||| |||||||||| ||||| || |||||| |||| ||| | | |||| | ||| Sbjct 178071 GGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCCGGAGGAG 178012 Query 135581 GCGCTACAACACG-CAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 ||||| | | ||| | || | | || ||| ||||||| | || || ||||| | || Sbjct 178011 GCGCT-CGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGACCCGAA 177953 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 || ||||| || || |||||||| || || | ||||| || || ||||||||||| Sbjct 177952 CGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATCCACGACCAGGGCTGGAAGGAGCG 177893 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 | || | || ||||| |||||||| |||||||| ||||| || Sbjct 177892 CGAAATATTCGGCAAAATTCGCTACATGAACTACGACGGCTG 177851 Score = 159 bits (176), Expect = 3e-34 Identities = 206/282 (73%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCAC 135520 ||||| ||| ||||||| ||||| || | |||| | ||| || | ||| |||||| Sbjct 180013 ACGCACGACGACCTGTGGAATGCGGCCCAGCTGCAGATGGTGCGCGAGGCCAAGATGCAC 179954 Query 135521 GGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAG 135580 || ||| |||||||||| ||||| || |||||| |||| ||| | | |||| | ||| Sbjct 179953 GGCTTTCTGCGCATGTACTGGGCGAAGAAGATACTGGAGTGGACGCGAACGCCGGAGGAG 179894 Query 135581 GCGCTACAACACG-CAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 ||||| | | ||| | || | | || ||| ||||||| | || || ||||| | || Sbjct 179893 GCGCT-CGAGACGGCCATCTACCTGAACGATCGCTACAGTCTGGACGGGCGCGACCCGAA 179835 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 || ||||| || || |||||||| || || | ||||| || || ||||||||||| Sbjct 179834 CGGGTACGTCGGGTGCATGTGGTCGATCGCGGGCATCCACGACCAGGGCTGGAAGGAGCG 179775 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 | || | || ||||| |||||||| |||||||| ||||| || Sbjct 179774 CGAAATATTCGGCAAAATTCGCTACATGAACTACGACGGCTG 179733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434731575364800