Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14]
34,365 sequences; 326,465,827 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2173 203 4e-47
>seq2173
Length=41539
Score = 203 bits (224), Expect = 4e-47
Identities = 963/1520 (63%), Gaps = 15/1520 (1%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||| || || |||| || | || |||||| || ||||| || || | ||
Sbjct 18215 TGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGAC 18156
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
|| ||||| ||||||||||| || || ||||| || ||||| || || | || |
Sbjct 18155 TCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAG 18096
Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA 77306
|| | | ||| ||| | || || || || || ||||| ||| || || |
Sbjct 18095 TTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTC 18036
Query 77307 GGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATAT 77366
||||| | ||| | ||||| || ||||| || || || | || || | ||
Sbjct 18035 GGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGTAC 17976
Query 77367 GTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAA 77426
|| || || ||||| || | || | || || || ||||||| || ||||| ||
Sbjct 17975 GTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAG 17916
Query 77427 ATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT 77486
|| || || || |||| || |||||| | || || || ||| || |||| |
Sbjct 17915 ATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCC 17856
Query 77487 AAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 77546
| | || || ||||| || | ||||| || || ||||| || || | || | | |
Sbjct 17855 ATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGCGCATG 17796
Query 77547 TTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTT 77606
|| || || ||||| || | || || | || | ||| ||||| || || | ||
Sbjct 17795 TTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTG 17736
Query 77607 CTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCATCTATA--- 77663
| || | ||| | || || || || || |||||| | | | ||
Sbjct 17735 CGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGTACGGTCGGACTGG 17676
Query 77664 ACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCA 77723
|| ||||||||||| || || || || || || || || || || || | | | | |
Sbjct 17675 ACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGCCACTTCGTC--CTTCGACG 17618
Query 77724 --TATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGT 77781
|| | | |||||||| || || ||| || ||||| ||||| | ||||| ||||
Sbjct 17617 AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGT 17558
Query 77782 TGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTG 77841
|||| || |||||| | |||||| || || || |||| || || || | ||| |
Sbjct 17557 TGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGG 17498
Query 77842 ATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTATCATAGATTTGTATCGCCTCTCT 77900
||||||| || | ||| | || || || |||| | || | || | |||
Sbjct 17497 ATTCGATGATCGCAAACCACA-GATCCTGCGCCTTTACCTGGCGGATGAAGCGGCCCTCC 17439
Query 77901 CTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960
| ||||| || || | | || || || || ||||| ||| ||||||| ||
Sbjct 17438 TTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGGGA 17379
Query 77961 CATTCATTTGGGCACATCAATGACCA-GTCACCATCTTCCTTAACTCGTTTCATAAAGAG 78019
|| || | ||||||||||| ||| || | || ||| || || | ||| || ||
Sbjct 17378 CAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCG-CCTCCACGCGCTGCATGAACAG 17320
Query 78020 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATT 78079
||| || ||||| || || || | || || | | || || || || || ||
Sbjct 17319 ATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGTT 17260
Query 78080 CTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCAT 78139
|| || ||||| | |||||| | | ||| ||||| || || || || || || |
Sbjct 17259 TTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAAA 17200
Query 78140 AACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCT 78199
| || || || ||||| || |||||||| | || | || ||||| || || || |
Sbjct 17199 CGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGCG 17140
Query 78200 CAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGC 78259
|| ||| || | | ||||| || |||| || || || || || || |||| | ||
Sbjct 17139 CAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCGC 17080
Query 78260 GCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAA 78317
|| || | | | | | | ||| || || || || ||| || || || |||||
Sbjct 17079 CCGGATGCAGTGC--ACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCAC 17022
Query 78318 CGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAG 78377
| |||| || |||||||| || || || ||||| || |||| | || ||||| ||
Sbjct 17021 TGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAA 16962
Query 78378 CTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAAC 78437
|||| || || | || | || || | ||||| || ||||| |||||
Sbjct 16961 GACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAG 16902
Query 78438 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATT 78497
| || || || ||||| || || || || || | || |||||| ||| ||
Sbjct 16901 TAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATG 16842
Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557
|| | || || ||||||| ||||||||| || || || || |||| || || |||
Sbjct 16841 CCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGACAATCTTGCCCTTGATCTTC 16782
Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCG 78617
||||| || || |||| ||||| || || ||||||||||| ||||| | |||
Sbjct 16781 AACAAATACGAACGCTCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTCACGATCG 16722
Query 78618 TAAATAATAACAGAATTTAG 78637
||||||||| | ||||||||
Sbjct 16721 TAAATAATAGCCGAATTTAG 16702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694370396333600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |