Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2173 176 6e-39 >seq2173 Length=41539 Score = 176 bits (194), Expect = 6e-39 Identities = 957/1520 (63%), Gaps = 15/1520 (1%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||| || || |||| || | || |||||| || ||||| || || | || Sbjct 18215 TGAAACTCGCCCGACAGAACGCGCCGGTTGTAAACGTTGGACGTATACGGCTCGAACGAC 18156 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 || ||||| ||||||||||| || || ||||| |||||||| || || | || | Sbjct 18155 TCGTTGTTGCCCAAAATTTGTGCCGTCGAAGCCGTCGGCATCGGCGCGAGCAGCAGTGAG 18096 Query 75842 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAT 75901 || | | ||| ||| | || || || || || ||||| ||| || || | Sbjct 18095 TTGCGCACACCGTGTTTGGCAATCTTTTCCTTCAGCGTCGCCCAATTCCACAGGTCCGTC 18036 Query 75902 GGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATAT 75961 ||||| | ||| | ||||| || ||||| || ||||| | || || | || Sbjct 18035 GGTACCTTGTTCCACATGTCGTACTGCAGAATGCCCTTGCTCACCGGAGACCCCTCGTAC 17976 Query 75962 GTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAA 76021 || ||||| | || |||| | || | ||||| || || || | ||||||||| || Sbjct 17975 GTCTCGTACGGTCCCTCCTGGGCGGCCATCTCGCAGCTAGCTTCCAGCGCACCGTAGTAG 17916 Query 76022 ATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGT 76081 || || || || |||| || ||| || | ||||| || ||| || | || | Sbjct 17915 ATGGTCTCAAATATCTGCTGATTGAGCTTCTGCGCCTCCGCACTCTCGTACGGGAAGCCC 17856 Query 76082 AAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTA 76141 | | || || ||||| || | ||||| || || ||||| || || | || | | | Sbjct 17855 ATCAAGATGAACGCATCAGCCATACCCTGGACGCCGATACCGATCGGACGGTGGCGCATG 17796 Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 || || | ||||| || | ||||| | || | || ||||| || || | || Sbjct 17795 TTCGAGCGCTTCGCTTCCGGCACCGGGTAGAAGTTCACGTCGATAATCTTGTTCAAGTTG 17736 Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATC--- 76258 | || | ||| | || || || || || |||||| | | | || | Sbjct 17735 CGCGTCACGATTTTGGCTACCTCTTTCAGCTTCGCGAAATCATACGTACGGTCGGACTGG 17676 Query 76259 ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCA 76318 || ||||| || | || || || || || || || || || || || | | | | | Sbjct 17675 ACGAACATGTTCAACGCAATCGAGGCCAGGTTGCACACCGCCACTTCGTC--CTTCGACG 17618 Query 76319 --TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGT 76376 || | | ||||| ||||| || ||| |||||||| || || | ||||| |||| Sbjct 17617 AGTACTCCACAATCTCGGTGCAAAGGTTAGAGCACTTGATGGTGCCGATGTTTTGCTGGT 17558 Query 76377 TGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTG 76436 |||| || || || | |||||| || || | |||| || || || | ||| | Sbjct 17557 TGCTTTTGCGATTGCACGCGTCCTTGTACAGCATGTACGGTACGCCCGTCTCCACCTGGG 17498 Query 76437 ATTCGATAATAGATTTCCAGACGACTCTA-GCTTTTA--TTATAGATTTGTATCGCTTCT 76493 ||||||| || | ||| | || || || |||| | ||| | | || || Sbjct 17497 ATTCGATGATCGCAAACCACA-GATCCTGCGCCTTTACCTGGCGGAT--GAAGCGGCCCT 17441 Query 76494 CTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAG 76553 | | ||||| || || ||| || || || || ||||| ||| |||| || | Sbjct 17440 CCTTCTCATAGCCCGTGTACAACTTCTCGAACTCTTCGCCCCACGAATCGGCCAATCCGG 17381 Query 76554 GACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGA 76613 |||| || | ||| |||||||| |||| | | ||| || || | ||| || | Sbjct 17380 GACAGTCGTGCGGGCACATCAAACTCCACGTTTCGTTCGCCTCCACGCGCTGCATGAACA 17321 Query 76614 GATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTAT 76673 |||| || ||||| || || || | || || | | || || || || || | Sbjct 17320 GATCCGGAATCCAGAGCGCGTAGAACATGTCCCGTGCGCGCACCTCCTCCTTGCCGGTGT 17261 Query 76674 TCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCA 76733 | || || ||||| | ||||| | | ||| ||||| || || || || || || | Sbjct 17260 TTTTCTTCAGATCCAAAAACTCAAACACATCGCCGTGCCACGGCTCCAGGTAGATGGCAA 17201 Query 76734 TAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTC 76793 ||||||| || ||||| || |||||||| | || | || ||||| || || || | Sbjct 17200 ACGCACCCGGCCGCTTATTGCCGCCCTGATCGACGTACCGTGCCGTGTTGTTGTACACGC 17141 Query 76794 TCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATG 76853 || ||| || | | ||||| || | || || || || || || || |||| | Sbjct 17140 GCAGCATCGGCACCAACCCGTTCGAAATTCCGTTCGTGCCGGAGATGTACGTTCCCTTCG 17081 Query 76854 CACGAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912 | || || | | | | || || || || || || || ||||| || || || Sbjct 17080 CCCGGATGC-AGTGCACGTTCAGCCCGATGCCACCGGCAGACTTGGAGATCAGTGCGCAC 17022 Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAG 76972 | |||| ||||| |||||||| || || || || || |||| | || ||||| || Sbjct 17021 TGCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCGTCGGACATGGTCAGCAGAAAGCAA 16962 Query 76973 CTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAAC 77032 |||| || || | || | || |||| || || || ||||| || || Sbjct 16961 GACGACAGCTGGGGACGCTGCGTAGCCGCCGCGAACATGGTCGGCGAGGCATGGGTAAAG 16902 Query 77033 CATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATT 77092 | || || || ||||| || || || || | || || || ||| ||| || Sbjct 16901 TAACGCTCCGAGAGCAGATTATACGTCTCGATCGCAGCCTCGATGTCCGTGCCATGGATG 16842 Query 77093 CCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTC 77152 || | ||||| ||||||| ||||||||| || | || ||| |||| || || ||| Sbjct 16841 CCGATGGCGACGCGCATCAGCATATGCTGCGGCCTCTCGACAATCTTGCCCTTGATCTTC 16782 Query 77153 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCG 77212 ||||| || || |||| ||||| || || ||||||||||| ||||| | ||| Sbjct 16781 AACAAATACGAACGCTCCAGGGTTTTGAAGCCGAAATAGTTGTACCCGAAGTCACGATCG 16722 Query 77213 TAAATAATAACCGAATTTAG 77232 ||||||||| |||||||||| Sbjct 16721 TAAATAATAGCCGAATTTAG 16702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712628150116800