Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20cracens_20[genbank_20GCA_5F002091845.1_202017-04-14] 34,365 sequences; 326,465,827 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq27055 120 6e-22 seq12267 86.0 1e-11 seq12243 86.0 1e-11 >seq27055 Length=447146 Score = 120 bits (132), Expect = 6e-22 Identities = 179/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||| |||||||| | ||| || ||||||||||| || || || ||| |||| Sbjct 54175 TCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAACT 54116 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| | || | ||| || |||||||||||||||||||| | ||| |||| |||| Sbjct 54115 GACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTCA 54056 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAAC 273957 |||| ||| ||| || ||||||||||| |||||| ||| || | ||| Sbjct 54055 CGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGAAC 53996 Query 273958 CACTGAACTGAGCAACCTTCAC--ATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAA 274015 | | ||| || |||||||| ||||| |||| || |||||||| | |||| Sbjct 53995 CCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCA--TTACGCTTGAAGCATGTGAACAA 53938 Query 274016 CACCTTCCGCTG 274027 |||||||||||| Sbjct 53937 CACCTTCCGCTG 53926 Score = 120 bits (132), Expect = 6e-22 Identities = 179/252 (71%), Gaps = 4/252 (2%) Strand=Plus/Plus Query 273778 TCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACT 273837 ||||||| |||||||| | ||| || ||||||||||| || || || ||| |||| Sbjct 65606 TCGTGAAGATGTACCTCGGACTGGCGCTATCCTTGCCACCGGTCAACCGCGTACCGAACT 65665 Query 273838 GACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCA 273897 |||| | || | ||| || |||||||||||||||||||| | ||| |||| |||| Sbjct 65666 GACCTCCCGGAAACAGCAGATTGATGTTGTTGCTACCGACGTAGTTCTGCGCCAGGTTCA 65725 Query 273898 CGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAAC 273957 |||| ||| ||| || ||||||||||| |||||| ||| || | ||| Sbjct 65726 CGATCGTCGAGCAAAGTGACTGTTCGCCGTGGTGGTAGGCGGACATTTCCGCCACCGAAC 65785 Query 273958 CACTGAACTGAGCAACCTTCAC--ATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAA 274015 | | ||| || |||||||| ||||| |||| || |||||||| | |||| Sbjct 65786 CCGCCAGCTGCGCCACCTTCACCTCTCGCTTGTCA--TTACGCTTGAAGCATGTGAACAA 65843 Query 274016 CACCTTCCGCTG 274027 |||||||||||| Sbjct 65844 CACCTTCCGCTG 65855 >seq12267 Length=503 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 331 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 275 >seq12243 Length=505 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||| Sbjct 333 TAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCG 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046278319094710