Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq5733 102 8e-17 >seq5733 Length=11217 Score = 102 bits (112), Expect = 8e-17 Identities = 173/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| ||||| || || |||||| ||| ||| | || ||||| ||||| ||| Sbjct 2708 ATGTACGTGTCGATTAGCAGCGAGTACATCTCGCTGTGCACATTTTCCATCGCTATTTGA 2767 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||||||||| || ||||||| || || || ||| ||| |||||| | || Sbjct 2768 AAGCCGTAAAAGCAGCGTGCTTCCGTTACCTGTACCTCCTGACTGAAGCGTTCCACCAGG 2827 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| || ||| ||||| || || || | | ||| ||||||| Sbjct 2828 TTCTCGTTAACGATACCATCGGATGCGGCAAAGAAGGCAAGCACGTGCGAGATGAAATGA 2887 Query 17414 TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 |||| |||| | || |||||| || | || || |||| ||| || ||||| Sbjct 2888 CGTTCGCTCGGTTTCAGCGATTCCCAGTCTTTCATGTCCTTCGATAGATCGACCTCTTCC 2947 Query 17474 GGGGTCCAAAA 17484 |||||| || Sbjct 2948 ACGGTCCAGAA 2958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517441042850160