Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq78 100 2e-16 >seq78 Length=100849 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||||||||| ||||||||| |||| | || ||||| |||||||||||||| || | Sbjct 92874 CAGTGACATGTGCGATCATATGGGTTAGCAAGGAGTAGCTTGCAATGTTAAAAGGTACAC 92815 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | | || | ||| ||||||| ||||| | ||| || || |||| |||||| ||| Sbjct 92814 CCAAACCGACATCGGCTGATCGCTGATACATCTGGCAAGACAGCTCCCCATCAGCAACAA 92755 Query 97235 AAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTC 97293 |||| || ||| ||| ||||| || || | ||||| || |||| || | |||| Sbjct 92754 AAAATTGTGCCAA-ACAGTGACAAGGCGGTAGGGCCATATTGGGAATGTCGGAAGGATTC 92696 Query 97294 CAAGCACACATCAACATTC 97312 ||||| | ||| | |||| Sbjct 92695 CAAGCGCTCATGATGATTC 92677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346715692438340