Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2169 118 2e-21 >seq2169 Length=21917 Score = 118 bits (130), Expect = 2e-21 Identities = 206/297 (69%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 189435 AAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGC 189494 |||| || || ||| |||||| || | || ||||||||||| | ||||| || |||| Sbjct 3672 AAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCGGGAAGGCAAGATGC 3731 Query 189495 ATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAG 189554 | | ||| | || ||||| ||||| ||||||||||| || ||||| | |||||| || | Sbjct 3732 ACGGCTTTCTGCGGATGTACTGGGCGAAGAAGATACTGGAGTGGACGAAAACACCGGAGG 3791 Query 189555 ACGC-TTTGAGTTATAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCT 189613 | || | ||| | |||||| ||||| | |||| || || || ||||| Sbjct 3792 AGGCGCTCGAGACGGCG-ATCTATCTGAACGATCGGTACAGCCTGGATGGGCGCGATCCG 3850 Query 189614 AACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAA 189673 ||||| ||||| || || |||||||| || ||| |||||||| | ||||| || Sbjct 3851 AACGGGTACGTCGGGTGCATGTGGTCGATCGCGGGAATACACGATCAGGGATGGAAGGAG 3910 Query 189674 AGACCGATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTT 189730 | || ||||| || || | || ||||| |||||| | | ||| |||||| Sbjct 3911 CGGGAAATTTTTGGCAAAATTCGTTACATGAACTATGAGGGCTGCAAGCGTAAATTT 3967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923010291166480