Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq78 120 3e-22 >seq78 Length=100849 Score = 120 bits (132), Expect = 3e-22 Identities = 234/346 (68%), Gaps = 0/346 (0%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || ||||| || ||||||| || || || | || |||||| || |||||||| | Sbjct 92880 TCAGTCCAGTGACATGTGCGATCATATGGGTTAGCAAGGAGTAGCTTGCAATGTTAAAAG 92821 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || | || | ||||| || | ||| |||| |||||| ||||||||||| || Sbjct 92820 GTACACCCAAACCGACATCGGCTGATCGCTGATACATCTGGCAAGACAGCTCCCCATCAG 92761 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 | || |||| || |||| ||||||||| || || ||||| | | ||| | | Sbjct 92760 CAACAAAAAATTGTGCCAAACAGTGACAAGGCGGTAGGGCCATATTGGGAATGTCGGAAG 92701 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCA 21228 | ||||| |||| ||| | ||| || ||||| | || | || ||| | | || Sbjct 92700 GATTCCAAGCGCTCATGATGATTCGACGATCATAAGGATTGTTTTTTATTTTGTGAATCA 92641 Query 21229 CGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCG 21288 | | || |||||| | ||||| || ||| | | ||| | |||||| | Sbjct 92640 CTTCTGCCAACTGGTCGATTCCCTGTCCTGTGTAATCGTCGTGGCATGTTTTGTACTTTG 92581 Query 21289 CCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 | |||||||| | |||||| || ||||| || || || ||||| || Sbjct 92580 CGCCAAAATGGCGCCACTGAAAGCCGTAAACTGGGCCTAGATCACC 92535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427691739089760