Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_006356.2 Length=36012 Score E Sequences producing significant alignments: (Bits) Value seq11431 125 2e-24 >seq11431 Length=3352 Score = 125 bits (138), Expect = 2e-24 Identities = 391/590 (66%), Gaps = 38/590 (6%) Strand=Plus/Minus Query 23071 AATATCAGCAGAAGAAGAGCTAAGAATTAGCCAAAAACCTACTAAGATTTTCACGGGAGA 23130 |||||| ||||| || |||||||||| ||||| ||| || | || || ||||| Sbjct 2913 AATATCGGCAGAGGATATTTTAAGAATTAGACAAAAGCCTCAAAAAGTATTTACTGGAGA 2854 Query 23131 TGCTTATGGATATATAGACTATCTTAGCCTAATA--AATATAAATAACGTAGGTACTAAG 23188 | ||| ||||| || | || | || | || || | ||| |||| ||| ||| Sbjct 2853 TATTTACGGATACAT-GTCT-TATTTGTCTGTTATTAGTATTGATAATTTAGAGGGTAAA 2796 Query 23189 TTTATGCCTATAGAATGGAGCTATGACAC--TAAGACAAACGTTACTAAAATG-AAATCT 23245 ||| | || || |||||||| | |||| | ||||| | || || || || ||| || Sbjct 2795 TTTTTACCAATTGAATGGAGTTTTGACGCATTAAGAAACACA--AC--AACTGTAAAACT 2740 Query 23246 TTAG-AATTGTTTGTTGATGAGATAGCAGATATAGATTACAAATATACTTTAGATTATGG 23304 || | |||| |||| |||||| | ||||||||||| |||| ||||||||||||||| Sbjct 2739 TTTGCAATTTTTTGGAGATGAGCTTAACGATATAGATTATAAATTTACTTTAGATTATGG 2680 Query 23305 CGAAACTGTTAAACCAACTATAAAAGGTTAA----TATGAATTTT----------ACTTT 23350 | || ||||| || || || | ||| ||| |||||| || || Sbjct 2679 AAATACAGTTAAGCCGACAATTACGTCATAAAATTTATTAATTTTGTAGTATGGAACATT 2620 Query 23351 ----AGGAGAAGATAGATTATTATACATAAAAGTAAACGGTGA-TTATTTGCCGATTGGA 23405 ||||||||| ||| ||||||| |||||| | | ||| || |||| | ||||| || Sbjct 2619 TCAAAGGAGAAGACAGAATATTATATATAAAA-TTATCGGGGACTTATATTCCGATAGGT 2561 Query 23406 TGCCTTA-CGGCTAATAGTTTGGAGGAATCTAGTGAATTTATTGATACTACAACTAGAGA 23464 || | | || | | | ||| | | || || ||| || || || ||||| ||||| Sbjct 2560 TGTTTGAGCGACAATTCATTTAGTGAAAGCT-CAGAAACAATCGACACGACAACAAGAGA 2502 Query 23465 TAACGCAGGATGGAGTACCTCAAGACCTGTATTACAAAACTATA--ATATTAGCTTTAGC 23522 |||||||| ||| || | |||| | | |||| |||| |||| | |||| | Sbjct 2501 CAACGCAGGTTGGTCCACGAGTAAACCTACAATGCAAAGTTATAGCATATCA--TTTAAC 2444 Query 23523 GGTTTACAGGTCAATACAACTTTAGGAGGTGGTGATTTTACGATAGCTAGTTATGACAAG 23582 || |||| |||||| |||| | | || || | |||| | || |||||||| Sbjct 2443 GGAATACAAGTCAATTCAACAATTGCTGGAGGAAACTTTAATGTCGCCAGTTATGATCGC 2384 Query 23583 CTAAGAGATTTTAAAAGGAATAAAATTCTTTTAGATTGGAAATTACAAGG 23632 ||| ||| ||||||| ||| | | ||||| |||||| | ||||| Sbjct 2383 TTAAAAGAGCTTAAAAGAGATAGACAATTATTAGAATGGAAAATTCAAGG 2334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 115094706352056