Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 132 5e-26 seq2169 127 2e-24 >seq2 Length=295332 Score = 132 bits (146), Expect = 5e-26 Identities = 299/442 (68%), Gaps = 17/442 (4%) Strand=Plus/Minus Query 147446 GAGATGCTGATTGACCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACT 147505 |||||| || || ||||| || |||||||||||| || | ||| || | || Sbjct 211745 GAGATGATGGTTCACCACCTGGAACTCGCCCGACAACACACGTCGATTATAAACGTTCGA 211686 Query 147506 AGTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCAT 147565 || |||||||||| ||||| ||||| || | || || || || | || |||||||| Sbjct 211685 TGTGTACGGCTCGAAAGACTCATTGTTGCCCAATATTTGCGCCGTTGAAGCGGTCGGCAT 211626 Query 147566 GTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCAT-TTCTCGCTTAAGCTCGT 147624 ||| | | ||||||||| || | |||||| | || || || || |||| |||| Sbjct 211625 CGGAGCCAAAAGTAATGAATTACGAATTCCGTGCTTTGCTATCTTTTCTTTTAA-CTCGG 211567 Query 147625 CCCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCAC 147684 |||||||||| ||||| ||| || | | ||||||| || ||||||| | || Sbjct 211566 CCCAGTTCCATAGATCCGTCGGTTCCT---TGTTCCACATTTCGTACTGTAATACGCCTT 211510 Query 147685 AACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATAC 147744 ||| | || ||||| || || | ||||| | |||| | ||| |||| ||| || Sbjct 211509 TGCTTACCGGACTTCCTTCATACGTCTCGTACGGACCGTCCCGTTCGGCTAACTCGCAAC 211450 Query 147745 TTTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTCTAGC 147802 | ||| || |||||||| ||||| ||||| | || | || ||| | | | || Sbjct 211449 --TCGCTTCCAGCGCACCATAGTAAATGGTTTCAAATATTTGTTGATTCAGCTTTTGGGC 211392 Query 147803 CTCTTGGCTGTCGTAGGGCATATC----CAAAATGGCGAACGTATCCGCAAGTCCTTGAA 147858 ||||| ||| ||||| || ||| | ||||| ||| | ||| || | ||||| | Sbjct 211391 CTCTTCGCTTTCGTACGG-ATAGCGCATTAAAAT---GAATGCATCGGCCATACCTTGCA 211336 Query 147859 TACCGATACCGATGGGTCGGTG 147880 |||||| || ||||| | ||| Sbjct 211335 CACCGATTCCAATGGGCCTGTG 211314 >seq2169 Length=21917 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 ||||||| || || || ||||| | || |||| ||| | || || || || | Sbjct 3672 AAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCGGGAAGGCAAGATGC 3731 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 |||| | || || ||||||||||| || ||||| || |||||||| |||| || ||| Sbjct 3732 ACGGCTTTCTGCGGATGTACTGGGCGAAGAAGATACTGGAGTGGACGAAAACACCGGAGG 3791 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 ||||||||||| | || ||||| |||||| | ||||| || || || |||||||| | Sbjct 3792 AGGCGCTCGAGACGGCGATCTATCTGAACGATCGGTACAGCCTGGATGGGCGCGATCCGA 3851 Query 71850 ACGGTTATGTCGGTTGCATGTGG 71872 |||| || ||||| ||||||||| Sbjct 3852 ACGGGTACGTCGGGTGCATGTGG 3874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478565698228640