Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5733 203 6e-47 >seq5733 Length=11217 Score = 203 bits (224), Expect = 6e-47 Identities = 299/417 (72%), Gaps = 11/417 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||||| ||||| || ||| |||| ||| | ||||||||||| |||||||| || ||| Sbjct 2595 CTGTTCAATGCCATTGAAACGTTGCCGTGCGTAAAGAAGAAGGCAGACTGGGCACTGAAC 2536 Query 42669 TGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCG 42726 |||||| ||| | || | |||| || ||||| | | || || ||| | ||||||| Sbjct 2535 TGGATCTCGAG-CAAGAAGGCCAACTTT-GGCGAACGTGTCGTGGCGTTTGCGGCCGTCG 2478 Query 42727 AGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC-- 42784 | |||||||||||| || ||| ||| |||| |||||||||||| || ||| | Sbjct 2477 AAGGCATCTTCTTCAGCGGTAGCTTTGCCGCCATTTTCTGGCTCAAGAAGC--GTGGCCT 2420 Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844 |||||| ||||| || ||||||||||| || || | ||||| || ||||| | || Sbjct 2419 GATGCCGGGACTGACGTTCTCGAACGAGCTGATTTCGCGCGACGAAGGACTGCACTGCGA 2360 Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904 |||||||||||| ||||| | |||| || || |||||||||||||| || Sbjct 2359 CTTTGCCTGCCTGATGTTC---AAGTACCTGGTACAGAAACCCTCGAAGGAGCGCGTGAC 2303 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 || |||||| || || || | ||||||| | || || | ||| | | ||||| || Sbjct 2302 GGACATCATTCGTGATGCGGTTGTGATCGAGCAAGAATTTTTGACGAAAGCCCTGCCGGT 2243 Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGA 43021 | || |||| ||||| ||| || |||| ||||||| ||| ||| ||||| Sbjct 2242 CGACATGCTCGGTATGAATTGCGATCTGATGTCGCAGTACATTGAGTTCGTGGCCGA 2186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944148419873120