Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq78 141 8e-29 >seq78 Length=100849 Score = 141 bits (156), Expect = 8e-29 Identities = 240/345 (70%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 20237 AGACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGA 20296 || ||||| ||||| || | ||||| |||| | ||| ||||| |||||||||||||| Sbjct 92878 AGTCCAGTGACATGTGCGATCATATGGGTTAGCAAGGAGTAGCTTGCAATGTTAAAAGGT 92819 Query 20297 ACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCT 20356 || |||||||| | || | || | |||||||| ||| || || ||||| || ||||| Sbjct 92818 ACACCCAAACCGACATCGGCTGATCGCTGATACATCTGGCAAGACAGCTCCCCATCAGCA 92759 Query 20357 ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGG 20416 ||| ||||||| || ||||||| ||||| || ||||| | | ||| | || Sbjct 92758 ACAAAAAATTGTGCCAAACAGTGACAAGGCGGTAGGGCCATATTGGGAATGTCGGAAGGA 92699 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| || | ||| ||||||| | ||| | ||||| ||||||||| | | | Sbjct 92698 TTCCAAGCGCTCATGATGATTCGACGATCATAAGGATTGTTTTTTATTTTGTGAATCACT 92639 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGT-CCACGTACGCCGC 20535 | | ||| ||||| | ||||| ||||| || || | | || | |||| || Sbjct 92638 TCTGCCAACTGGTCGATTCCCTGTCCTGTGTAATCGTCGT-GGCATGTTTTGTACTTTGC 92580 Query 20536 CCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 ||||| || | |||||| || |||||||| || || | ||| || Sbjct 92579 GCCAAAATGGCGCCACTGAAAGCCGTAAACTGGGCCTAGATCACC 92535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441283631660080