Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20culicifacies_20[genbank_20GCA_5F000473375.1_202013-09- 30] 16,162 sequences; 202,998,806 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2169 104 2e-17 seq1402 104 2e-17 >seq2169 Length=21917 Score = 104 bits (114), Expect = 2e-17 Identities = 192/279 (69%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 37821 GCCGACACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAG 37880 ||| | |||||||| |||||||| |||| || | ||| | ||||| || || ||| Sbjct 3668 GCCAAAACGCACGACGATCTGTGGAACTCGGCCCAGCTGCAGATGGTGCGGGAAGGCAAG 3727 Query 37881 ATGCATCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCT 37940 ||||| | | |||| ||||| ||| ||||| || |||| ||| | | | Sbjct 3728 ATGCACGGCTTTCTGCGGATGTACTGGGCGAAGAAGATACTGGAGTGGACGAAAACACCG 3787 Query 37941 CAGACCGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGAT 38000 || |||||| | || || ||||| || ||| ||||||| |||| ||||| ||| Sbjct 3788 GAGGAGGCGCTCGAGACGGCGATCTATCTGAACGATCGGTACAGCCTGGATGGGCGCGAT 3847 Query 38001 CCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGC-TACACGATAGAGCCTGGCG 38059 || ||||| |||||||| || ||||||| || ||||| |||||||| | ||| Sbjct 3848 CCGAACGGGTACGTCGGGTGCATGTGGTCGATC-GCGGGAATACACGATCAGGGATGGAA 3906 Query 38060 CGAGATTCCCATTTACGGCAAGATTCGGTACATGAACTA 38098 ||| |||| ||||| ||||| ||||||||||| Sbjct 3907 GGAGCGGGAAATTTTTGGCAAAATTCGTTACATGAACTA 3945 >seq1402 Length=30251 Score = 104 bits (114), Expect = 2e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || |||||||| ||||| ||| |||||||||||||||||| || | | Sbjct 9267 CCACCGCGCAGGCGAAGCACCAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 9208 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | | || |||| |||| ||||| |||||||| ||||| |||||||||||| ||| Sbjct 9207 AGTGTGCGACCGTCCTCCAGCTGCTTACCGGCAAAGATCAGACGCTGCTGATCCGGCGGG 9148 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| || ||| Sbjct 9147 ATGCCCTCCTTATCC 9133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396984188881924